| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_80517 |
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| Symbol | HXT2.4 |
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| ID | 4850978 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 614841 |
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| End bp | 616618 |
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| Gene Length | 1778 bp |
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| Protein Length | 547 aa |
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| Translation table | |
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| GC content | 41% |
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| IMG OID | 640392686 |
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| Product | probable hexose transporter |
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| Protein accession | XP_001387757 |
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| Protein GI | 126273939 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0738] Fucose permease |
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| TIGRFAM ID | [TIGR00879] MFS transporter, sugar porter (SP) family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.663826 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00990002 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTCTGACA AACTTCACAA CATCAAGGAT CAGACCGATT CCCTTTCGAT CACTGATCAC
ATTGATGAAC AGCAAAACAT CTTGAACGAT CCTAACACCG ACATCAATGA CTTATTGTTC
CAAACTGACG GTTGGTGGAA ATACGGCCAT TTCAGAAAGT TGCATTTCAT GATTGCCTTG
ATTGCCTTGG CCTCCACCAA TAATGGTTAC GATGGTTCCA TGTTGAACGG TTTGCAAGCT
ATTCCCGATT GGCAAACTAC CATGGGTACG CCAGAAGGGT ACAAGTTGGG TTCTCTTGCC
AACGGTACCA TGTTCGGTTC TATTATCGCT GTCAGTTGTG CTTCTTACCT TAACGACAAG
TGGGGAAGAA AGTTCGGTGT TCTCTTCGGT TCTATTATTT CTTTTATAGG TGGTATCTTG
CAAGGTGCAT CTACTAATTA CGCTTTCTTC TTGGTTGCAA GAATCATCAT TGGTTTTGGT
GTCGGTATTG CTTTGACTGG TGCTCCCGCT TGGATCGCTG AACTTTCTTT CCCATCTTAC
AGATCATCTT GTACTGCTGT CTTCAACACT TTGTGGTATT TGGGTGCTAT TCTTGCTGCT
TGGATTACTT TTGGTACCGA GAAATTGCAT GGGCCAAAGG CATGGAGAAT TCCTTCCTAC
TTGCAGGCAA TCTTGCCAGG TATCCAAGTT TTGACTTTGT GGTTCTGTCC TGAGTCTCCA
AGATGGTTAA TTGACAACGG TAAGGAAGAG AAGGCAAGAT CAGTTCTTAA TGCTTACCAC
ACTGGTAACG TTGACGACGA AAGAGCTCAT GCTTTGGTTG AATTCGAAAT CAAGGAAATC
AAGTCTGCTT TGGAATTAGA AAAGTTATAT GCCAGCTCTT CTTACTTTGA CTTCCTCAAG
ATTAGATCCT ATAGAAAGAG ATTATTCTTG GTTTGTTTTA CTGCTTTCAT CATGCAAATG
TCTGGTAACG GTTTAGTGTC CTATTATCTT GTTAAGGTCT TGAGAAGTAT TGGTTATGAG
TCACCTACTG AACAATTGAA GATCAACGGT TGTTTACAAG TCTTCAACAT TGTAATTTCC
GTCGGTGCTG CTCTCCTTAC CTACAGATTC AAGAGAAGAC ACCAATTCTT GGTTTGTATT
GCTGGTATGC TTCTCTGTTA CGTTATTTGG ACCGTTCTTT CTGCAATTAA CCAACAACGT
AACTTCGAAG ACAAGGGATT GGGTAGAGGT ATTCTTGCCA TGATCTTTTT GTTCTACTTC
TCTTACGATA TTGGTGCTAA TGGTTTGCCA TTCTTGTATG CTACTGAAGT GTTGCCATAC
TCCCACAGAG CTAAGGGTCT TAACTTGATG TACTTCACCC AATTGTGTAC TCTTGTCTAC
AACGGTTACG TCAACCCAAT TGCCATGGAT GCAATCGAAT GGAAGTACTA CATTGTTTGG
TGTTGTGTCT TGGCCTTCGA ATTGGTTATT GTGTTCTTCT TCTACGTCGA AACCTTCGGT
TACACCTTGG AAGAGGTTGC CGTTGTTTTC GGTGACGATG CCGGTACCAC ATTGCACAGA
CTTTCTTCTC CTGTTGAAAA ATCTGCTGTC GAACACTTGG AAGACGGCAA CTCTTCAAAC
GAGAAGATTG GTGAAAGAGT TTAAGATAGC TGAACTTATT CTAATTCCAT AATACTATGA
GTTTCAATTC TTTAATATGC TGACAAATCT GTCATTAATT GTTTTTTAAC AACGGTATAT
ATGTTCTAAG CTTTAGTCAA TAAATTATAC CTGATTAT
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| Protein sequence | MSDKLHNIKD QTDSLSITDH IDEQQNILND PNTDINDLLF QTDGWWKYGH FRKLHFMIAL
IALASTNNGY DGSMLNGLQA IPDWQTTMGT PEGYKLGSLA NGTMFGSIIA VSCASYLNDK
WGRKFGVLFG SIISFIGGIL QGASTNYAFF LVARIIIGFG VGIALTGAPA WIAELSFPSY
RSSCTAVFNT LWYLGAILAA WITFGTEKLH GPKAWRIPSY LQAILPGIQV LTLWFCPESP
RWLIDNGKEE KARSVLNAYH TGNVDDERAH ALVEFEIKEI KSALELEKLY ASSSYFDFLK
IRSYRKRLFL VCFTAFIMQM SGNGLVSYYL VKVLRSIGYE SPTEQLKING CLQVFNIVIS
VGAALLTYRF KRRHQFLVCI AGMLLCYVIW TVLSAINQQR NFEDKGLGRG ILAMIFLFYF
SYDIGANGLP FLYATEVLPY SHRAKGLNLM YFTQLCTLVY NGYVNPIAMD AIEWKYYIVW
CCVLAFELVI VFFFYVETFG YTLEEVAVVF GDDAGTTLHR LSSPVEKSAV EHLEDGNSSN
EKIGERV
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