38 homologs were found in PanDaTox collection
for query gene Swol_0399 on replicon NC_008346
Organism: Syntrophomonas wolfei subsp. wolfei str. Goettingen



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008346  Swol_0399  hydrogenase, methyl-violgen-reducing type, delta subunit, selenocysteine-containing  100 
 
 		 52 aa  107  6e-23  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  1  n/a   
 
 
-
 
NC_013216  Dtox_1354  methyl-viologen-reducing hydrogenase delta subunit  55.77 
 
 		 144 aa  66.6  0.0000000001  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.774154  normal  0.442745 
 
 
-
 
NC_013385  Adeg_1332  methyl-viologen-reducing hydrogenase delta subunit  48.08 
 
 		 146 aa  62.4  0.000000002  Ammonifex degensii KC4  Bacteria  normal  0.931866  n/a   
 
 
-
 
NC_010424  Daud_0566  methyl-viologen-reducing hydrogenase, delta subunit  44.23 
 
 		 144 aa  56.2  0.0000002  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  1  n/a   
 
 
-
 
NC_013165  Shel_17780  coenzyme F420-reducing hydrogenase, delta subunit  51.02 
 
 		 173 aa  53.1  0.000001  Slackia heliotrinireducens DSM 20476  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013216  Dtox_1278  methyl-viologen-reducing hydrogenase delta subunit  42.22 
 
 		 144 aa  50.8  0.000007  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  1  normal  0.264877 
 
 
-
 
NC_008554  Sfum_1973  methyl-viologen-reducing hydrogenase, delta subunit  47.73 
 
 		 143 aa  50.4  0.000008  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010803  Clim_1199  methyl-viologen-reducing hydrogenase delta subunit  43.18 
 
 		 149 aa  50.4  0.000009  Chlorobium limicola DSM 245  Bacteria  normal  0.461451  n/a   
 
 
-
 
NC_007512  Plut_1110  hydrogenase, methyl-violgen-reducing type, delta subunit  40.91 
 
 		 149 aa  49.3  0.00002  Chlorobium luteolum DSM 273  Bacteria  normal  0.906515  normal  0.318255 
 
 
-
 
NC_008554  Sfum_1793  methyl-viologen-reducing hydrogenase, delta subunit  36.36 
 
 		 114 aa  47  0.00009  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  1  normal  0.944587 
 
 
-
 
NC_009253  Dred_0145  heterodisulfide reductase subunit  40 
 
 		 61 aa  47  0.0001  Desulfotomaculum reducens MI-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009635  Maeo_0099  methyl-viologen-reducing hydrogenase delta subunit  47.73 
 
 		 141 aa  47  0.0001  Methanococcus aeolicus Nankai-3  Archaea  normal  0.585779  n/a   
 
 
-
 
NC_009483  Gura_0148  methyl-viologen-reducing hydrogenase, delta subunit  34.69 
 
 		 161 aa  45.8  0.0002  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_009483  Gura_3584  methyl-viologen-reducing hydrogenase, delta subunit  34.69 
 
 		 188 aa  45.8  0.0002  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_011060  Ppha_1305  methyl-viologen-reducing hydrogenase delta subunit  38.64 
 
 		 149 aa  45.1  0.0003  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008639  Cpha266_1259  methyl-viologen-reducing hydrogenase, delta subunit  36 
 
 		 149 aa  45.1  0.0003  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  1  n/a   
 
 
-
 
NC_010718  Nther_2661  F420-non-reducing hydrogenase subunit D  36.54 
 
 		 144 aa  45.4  0.0003  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009634  Mevan_0998  methyl-viologen-reducing hydrogenase delta subunit  43.18 
 
 		 134 aa  45.4  0.0003  Methanococcus vannielii SB  Archaea  normal  1  n/a   
 
 
-
 
NC_010814  Glov_0865  methyl-viologen-reducing hydrogenase delta subunit  32.65 
 
 		 166 aa  44.3  0.0006  Geobacter lovleyi SZ  Bacteria  normal  1  n/a   
 
 
-
 
NC_013385  Adeg_2015  methyl-viologen-reducing hydrogenase delta subunit  37.78 
 
 		 146 aa  43.9  0.0008  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_010424  Daud_1653  methyl-viologen-reducing hydrogenase, delta subunit  40.91 
 
 		 146 aa  43.1  0.001  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.531476  n/a   
 
 
-
 
NC_007514  Cag_1030  hydrogenase, methyl-violgen-reducing type, delta subunit  40.91 
 
 		 149 aa  43.5  0.001  Chlorobium chlorochromatii CaD3  Bacteria  normal  0.485491  n/a   
 
 
-
 
NC_007517  Gmet_3427  methyl-viologen-reducing hydrogenase, delta subunit  36.17 
 
 		 168 aa  43.1  0.001  Geobacter metallireducens GS-15  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007955  Mbur_0552  CoB--CoM heterodisulfide reductase subunit A  36.36 
 
 		 786 aa  43.5  0.001  Methanococcoides burtonii DSM 6242  Archaea  normal  0.0563725  n/a   
 
 
-
 
NC_011883  Ddes_2101  methyl-viologen-reducing hydrogenase delta subunit  32 
 
 		 482 aa  42.4  0.002  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.212274  n/a   
 
 
-
 
NC_013385  Adeg_1784  methyl-viologen-reducing hydrogenase delta subunit  41.86 
 
 		 270 aa  42.4  0.002  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_013223  Dret_0420  methyl-viologen-reducing hydrogenase delta subunit  36.36 
 
 		 139 aa  42.4  0.002  Desulfohalobium retbaense DSM 5692  Bacteria  normal  1  normal  0.440968 
 
 
-
 
NC_011769  DvMF_0325  methyl-viologen-reducing hydrogenase delta subunit  33.33 
 
 		 501 aa  42.4  0.002  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.393409 
 
 
-
 
NC_012918  GM21_0028  methyl-viologen-reducing hydrogenase delta subunit  32.61 
 
 		 193 aa  42  0.003  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_008554  Sfum_0823  methyl-viologen-reducing hydrogenase, delta subunit  37.78 
 
 		 140 aa  42  0.003  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  1  normal  0.400566 
 
 
-
 
NC_002939  GSU0089  heterodisulfide reductase subunit  32.65 
 
 		 166 aa  42  0.003  Geobacter sulfurreducens PCA  Bacteria  normal  0.633764  n/a   
 
 
-
 
NC_009675  Anae109_4307  methyl-viologen-reducing hydrogenase delta subunit  40 
 
 		 488 aa  40.8  0.006  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  0.340367 
 
 
-
 
NC_011146  Gbem_0029  methyl-viologen-reducing hydrogenase delta subunit  32.61 
 
 		 175 aa  40.8  0.006  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_008554  Sfum_2148  methyl-viologen-reducing hydrogenase, delta subunit  29.55 
 
 		 161 aa  40.8  0.006  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008751  Dvul_0829  methyl-viologen-reducing hydrogenase, delta subunit  37.21 
 
 		 494 aa  40.8  0.006  Desulfovibrio vulgaris DP4  Bacteria  normal  0.330153  normal  1 
 
 
-
 
NC_009135  MmarC5_1710  methyl-viologen-reducing hydrogenase, delta subunit  40.91 
 
 		 134 aa  40.4  0.008  Methanococcus maripaludis C5  Archaea  normal  1  n/a   
 
 
-
 
NC_013926  Aboo_0979  methyl-viologen-reducing hydrogenase delta subunit  37.78 
 
 		 148 aa  40.4  0.009  Aciduliprofundum boonei T469  Archaea  hitchhiker  0.000000000116298  n/a   
 
 
-
 
NC_007355  Mbar_A2589  CoB--CoM heterodisulfide reductase subunit A  31.82 
 
 		 792 aa  40  0.01  Methanosarcina barkeri str. Fusaro  Archaea  normal  1  normal  0.295963 
 
 
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