27 homologs were found in PanDaTox collection
for query gene Rpal_3988 on replicon NC_011004
Organism: Rhodopseudomonas palustris TIE-1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011004  Rpal_3988  phage terminase, small subunit, , P27 family  100 
 
 		 125 aa  251  2.0000000000000002e-66  Rhodopseudomonas palustris TIE-1  Bacteria  normal  1  n/a   
 
 
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NC_007406  Nwi_1617  phage terminase, small subunit, putative, P27  52.89 
 
 		 131 aa  106  1e-22  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.207143  normal  0.415042 
 
 
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NC_007406  Nwi_1473  phage terminase, small subunit, putative, P27  51.24 
 
 		 131 aa  105  3e-22  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.889427  normal  0.331074 
 
 
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NC_009428  Rsph17025_1369  P27 family phage terminase small subunit  45.26 
 
 		 143 aa  103  8e-22  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  1  normal  0.369715 
 
 
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NC_009049  Rsph17029_0286  P27 family phage terminase small subunit  44.29 
 
 		 144 aa  100  8e-21  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  1  normal  1 
 
 
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NC_007493  RSP_2353  hypothetical protein  48.06 
 
 		 131 aa  99.4  2e-20  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  1  n/a   
 
 
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NC_007964  Nham_2481  phage terminase, small subunit, putative, P27  42.19 
 
 		 130 aa  84.7  4e-16  Nitrobacter hamburgensis X14  Bacteria  normal  1  n/a   
 
 
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NC_010721  Mpop_5450  hypothetical protein  44.96 
 
 		 130 aa  79  0.00000000000002  Methylobacterium populi BJ001  Bacteria  n/a    n/a   
 
 
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NC_007964  Nham_1724  phage terminase, small subunit, putative, P27  35.04 
 
 		 138 aa  72.8  0.000000000002  Nitrobacter hamburgensis X14  Bacteria  normal  0.0277511  n/a   
 
 
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NC_007964  Nham_0334  phage terminase, small subunit, putative, P27  35.71 
 
 		 137 aa  69.7  0.00000000001  Nitrobacter hamburgensis X14  Bacteria  normal  1  n/a   
 
 
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NC_007964  Nham_2021  phage terminase, small subunit, putative, P27  35.71 
 
 		 137 aa  69.7  0.00000000001  Nitrobacter hamburgensis X14  Bacteria  normal  1  n/a   
 
 
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NC_010508  Bcenmc03_1288  P27 family phage terminase small subunit  32.2 
 
 		 132 aa  51.6  0.000003  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.163062  normal  1 
 
 
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NC_011989  Avi_0871  Phage terminase protein  32.85 
 
 		 145 aa  50.8  0.000006  Agrobacterium vitis S4  Bacteria  normal  0.0530685  n/a   
 
 
-
 
NC_007493  RSP_1651  hypothetical protein  29.84 
 
 		 145 aa  50.4  0.000008  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  1  n/a   
 
 
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NC_014150  Bmur_1314  Phage terminase small subunit-like protein  24.35 
 
 		 132 aa  50.1  0.00001  Brachyspira murdochii DSM 12563  Bacteria  normal  1  n/a   
 
 
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NC_014150  Bmur_1698  Phage terminase small subunit-like protein  24.35 
 
 		 132 aa  50.1  0.00001  Brachyspira murdochii DSM 12563  Bacteria  normal  1  n/a   
 
 
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NC_014150  Bmur_2274  Phage terminase small subunit-like protein  24.35 
 
 		 132 aa  50.1  0.00001  Brachyspira murdochii DSM 12563  Bacteria  normal  1  n/a   
 
 
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NC_009049  Rsph17029_0646  P27 family phage terminase small subunit  31.3 
 
 		 161 aa  48.9  0.00002  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.646797  normal  1 
 
 
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NC_013037  Dfer_5504  phage terminase, small subunit, , P27 family  30.69 
 
 		 144 aa  48.5  0.00003  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011725  BCB4264_A2620  phage terminase, small subunit, putative, P27 family  30.36 
 
 		 167 aa  47.4  0.00006  Bacillus cereus B4264  Bacteria  normal  0.0118703  n/a   
 
 
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NC_009012  Cthe_1723  P27 family phage terminase small subunit  29.63 
 
 		 160 aa  46.2  0.0001  Clostridium thermocellum ATCC 27405  Bacteria  decreased coverage  0.000117045  n/a   
 
 
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NC_011830  Dhaf_1454  phage terminase, small subunit, , P27 family  35.58 
 
 		 165 aa  46.6  0.0001  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
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NC_008751  Dvul_0871  P27 family phage terminase small subunit  30.56 
 
 		 152 aa  45.8  0.0002  Desulfovibrio vulgaris DP4  Bacteria  normal  0.831198  normal  1 
 
 
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NC_010002  Daci_1630  hypothetical protein  29.55 
 
 		 145 aa  45.4  0.0003  Delftia acidovorans SPH-1  Bacteria  normal  0.299301  normal  1 
 
 
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NC_013411  GYMC61_0622  phage terminase, small subunit, , P27 family  30.77 
 
 		 165 aa  42.4  0.002  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
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NC_014149  Plim_4249  phage terminase, small subunit, , P27 family  26.92 
 
 		 160 aa  40.8  0.007  Planctomyces limnophilus DSM 3776  Bacteria  normal  1  n/a   
 
 
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NC_007434  BURPS1710b_1678  P27 family phage terminase small subunit  31.68 
 
 		 161 aa  40.4  0.009  Burkholderia pseudomallei 1710b  Bacteria  normal  0.253906  n/a   
 
 
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