10 homologs were found in PanDaTox collection
for query gene RPC_1615 on replicon NC_007925
Organism: Rhodopseudomonas palustris BisB18



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007925  RPC_1615  calcium-binding EF-hand  100 
 
 		 262 aa  475  1e-133  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.959507  normal  1 
 
 
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NC_007958  RPD_1772  calcium-binding EF-hand  57.28 
 
 		 254 aa  172  3.9999999999999995e-42  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.389103  normal  0.418687 
 
 
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NC_011004  Rpal_4339  putative signal transduction protein with EFhand domain  57.83 
 
 		 256 aa  147  1.0000000000000001e-34  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.1378  n/a   
 
 
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NC_007778  RPB_3688  signal transduction protein  53.37 
 
 		 252 aa  146  4.0000000000000006e-34  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  1 
 
 
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NC_009485  BBta_5331  calcium-binding domain-containing protein  46.51 
 
 		 256 aa  139  3.9999999999999997e-32  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0194602  normal  0.50977 
 
 
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NC_013093  Amir_3842  putative signal transduction protein with EFhand domain  39.62 
 
 		 178 aa  48.1  0.0001  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00258503  n/a   
 
 
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NC_010814  Glov_1545  Calcium-binding EF-hand-containing protein  34.78 
 
 		 295 aa  47.4  0.0003  Geobacter lovleyi SZ  Bacteria  normal  1  n/a   
 
 
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NC_009719  Plav_0950  signal transduction protein  40 
 
 		 242 aa  45.8  0.0006  Parvibaculum lavamentivorans DS-1  Bacteria  normal  1  normal  1 
 
 
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NC_013595  Sros_2609  hypothetical protein  44.68 
 
 		 181 aa  45.1  0.001  Streptosporangium roseum DSM 43021  Bacteria  normal  0.339179  normal  0.690137 
 
 
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NC_006692  CNG04140  conserved hypothetical protein  34.26 
 
 		 390 aa  42.7  0.006  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  0.468801  n/a   
 
 
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