9 homologs were found in PanDaTox collection
for query gene PSPTO_2082 on replicon NC_004578
Organism: Pseudomonas syringae pv. tomato str. DC3000



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_004578  PSPTO_2082  tail length tape measure protein, internal deletion  100 
 
 		 277 aa  545  1e-154  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  decreased coverage  0.000504632  n/a   
 
 
-
 
NC_004578  PSPTO_4046  tail tape measure protein  74.31 
 
 		 1222 aa  147  2.0000000000000003e-34  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.374256  n/a   
 
 
-
 
NC_010322  PputGB1_3396  lambda family phage tail tape measure protein  51.95 
 
 		 908 aa  147  2.0000000000000003e-34  Pseudomonas putida GB-1  Bacteria  normal  0.799108  hitchhiker  0.00000000000741098 
 
 
-
 
NC_011663  Sbal223_2583  phage tail tape measure protein, lambda family  35.37 
 
 		 1122 aa  61.2  0.00000002  Shewanella baltica OS223  Bacteria  normal  1  normal  0.887267 
 
 
-
 
NC_010159  YpAngola_A2200  prophage tail length tape measure protein, putative  32.61 
 
 		 1167 aa  52  0.00001  Yersinia pestis Angola  Bacteria  normal  1  normal  0.897137 
 
 
-
 
NC_003295  RSc1690  phage hk97 tail length tape measure-related protein  37.25 
 
 		 957 aa  50.8  0.00002  Ralstonia solanacearum GMI1000  Bacteria  normal  0.260422  normal  0.358408 
 
 
-
 
NC_004347  SO_2953  prophage LambdaSo, tail length tape meausure protein  34.1 
 
 		 914 aa  47.4  0.0002  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_011083  SeHA_C1151  gifsy-1 prophage VmtH  29.61 
 
 		 1028 aa  42.4  0.009  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011205  SeD_A1416  gifsy-1 prophage VmtH  29.61 
 
 		 1028 aa  42  0.01  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.312107  hitchhiker  0.00396593 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>