| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3396 |
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| Symbol | |
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| ID | 5871181 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 3832647 |
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| End bp | 3835373 |
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| Gene Length | 2727 bp |
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| Protein Length | 908 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641548511 |
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| Product | lambda family phage tail tape measure protein |
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| Protein accession | YP_001669623 |
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| Protein GI | 167034392 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5281] Phage-related minor tail protein |
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| TIGRFAM ID | [TIGR01541] phage tail tape measure protein, lambda family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.799108 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00000000000741098 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCCAGG GTGATATTGC CGTTCTCGGC ATCAGGGTTG AATCAGGCGA GGCTGTATCT
GCTGCTGACG ATCTCGACAA GCTGACGAAA GCCGGCGAGC GTGCTGAGGT TGCTACAGGC
AGCGTCGGCG CCCAAGCAAA AAGCTCCGGC GTATCGATCA AGGACCTTGC GGCCAGCACT
CAGTCCACCG AGCAAGCAAT GGATAGATAT GCCCGCCAGG CTCAGGCGGC AGGTATGTCA
ACGAAGGCTT ACGCAGCTGC TTTGCGGACG GTGCCAGCAC AGCTGAGCGA CATCGTTGTC
GGATTGCAAG GCGGCCAGTC GATCATGACT GTCGCCTTGC AGCAAGGCAG TCAGTTGCGA
GACCAGTTCG GTGGGGTAGG TTCCGCAGCT CGCGCACTAG GTGGCCATCT CCTCAGTCTT
GTGAATCCAT ATTCTGTGCT TGCGGCAGCT GTAGCGGGGG CTGGACTCGC ATATTACAAA
GGCCAGCAAG AGGCAGAGGA ATTTAGAAAG GCGTTAATCC TAACTGGCAA TGCTGCTGGA
ACGAACTCCG GGGCTCTTGC GGACCTGTCG AGACAGATCA GCACCACTGT TGGAACTACC
GGGGCCGCGG CAGAGGTGCT CGCACAGCTT GCAGGCAGCG GGAAGATTGC CGGAGATAGT
TTTAGCACCG TCGCAACTGC AGCCTTGCAG ATGAAGGACG CAACAGGTCG CGCGATTGAG
GAGACCATCG CCGACTTTGT GAGGATCGGT AAAGATCCAG TGGCAGCCGC AAGGGAGCTG
GAAGAGCAGT ATGGTTTTTT AACCGCCAGC ACGTATGCCC AAATTGCGGC GATGAAGGAC
CAGGGCGATA CCGTTGGCGC TGCGAAATTA TTGACTGACG AGTACGCTCG AACTATCGAC
ACCCGGTCGA AGGAGATCGT CGAGAACCTC GGATGGATCG AGAAGGCATG GCGCGGCGTA
TGGGGCATGA CGAAGAATGC CGGAGATGCA GCTCTCAACT TTGGCAGAAC TCAAGGAATT
GCTCAGCAGT TGGCAGCGGC ACAGGCTGAC CTGGCCGATC TTGAAAAAAG AGCTGGAGAG
AACAAAATTG TCGCCGCTAG TGCCCAAGCG AAAGCAGAGC GCGAGCTACT ACAGAGCAGA
ATTACTGCGT TAGGCGATCA GCTCAAAACC CAGCAAGCCA TCGACCAAGC CCAGGAGAAC
TACCGGCAGC GCCAGAGAGA CTCGATCCTG TCTCAGGAAA CCCTGAACGG GCAGCTGCGC
ACCACGGCGA GCAACCAGGA AAAGCTGGCC AAGCGGCTCA AGGAGATCGA CGAGCTGGCC
AAGAAGTCTG CCGTCGGCGA TGGCGGACGG GTGTACACCG AGGCCGAGTT GAACCAGCTT
CGCGACGCGG CTCGCGAGCA GTTCAAGGAT AAGCCCGTAC ACAAGGGGCC CGCCTATCGC
GAAGACGCCG GCACCAAGGC CCTCGACCAA GCTCGCCAGC AATACTCGGT GCTACAGCAG
CAGAATGGCC TAATCGGTGC CCAGCGCGGC GAGATGCAGA AGCTGGGCGA AGCTGGCCAA
GCCCTGGTGC GCTGGGAGCA GCAACTGGCC GACATCAAGG ACAAGAAGAC CTTAACCGCC
GACCAGAAGT CGCTGCTGGC GAATCAGGAT CTGATCACTG CTCAGCTGAA GCGCAACGCA
GGGCTCGAGC GCGAAATGCA ACTGCGTAAA GTAGCCACGG AAGAAGCGCA GAAACTGGCG
GCCTTCGAAG CAAACCTGAA CAGCCAGCTG CAGCGCGCAT CGGTGGGCTT GGACAACAAC
CTGGCCGGCA TGGGTCTTGG CGACCAGGCC CAGCAGCGCC TGCAAGAGCG ATTCAGCATC
GAGCAGCAGT ATCAGCAGCA GATGGACAAC CTGTTGCAGC AGCGCAACGA GGGACGTATT
AGCGAGAGCC TTTATCAAAA GGAAAACGCC GCCCTGCAAA GCGCGCTGGA TCAGCGGTTG
GCTAAGCAGG GACAGTACTA CCAGCGCGTC GATGAGTTGC AGTCAGACTG GTCGGTTGGT
GCACGGGCCG CATTCGGCAC CTACCTTGAG CAGGCGCGCA ATGTCGCGGG GCAAACAAGA
ACGCTGTTCA CCAATGCTTT CTCCAACATG GAAGACAGCA TCGTCACCTT CGTCAAAACC
GGGAAGCTGT CCTTCAAGGA TTTTGCGGAT GGAGTTATTG AGGACCTGAT CCGCATCCAG
GTGCGGCAGG CGGCTGTCGG CTTTCTTAGT ACTGCATTCG GCTTCTTGGG CGGTGGTAGC
CAGGCGCTAG GCCAAGGCAC CATGACGGGA TTCAGTGAGC CGCTTAAGCA GCTTTCCACC
GGCGGTTATA CCGGTGACGG CGGCAAGTTT GAACCGAAGG GGGTGGTGCA CGGCGGTGAA
TTCGTCCTCC GCAAGGAGGT GGTGGCCCAG CCAGGTATGC GCAACTACCT GGAGGGGCTG
AACGTCAGGG GTTACGCCTC CGGCGGATTC GTGACGCCGC GGATAGCCTC GACCGCTACG
CAAATGGCTG CCAGCCAGCC CGAGGCGTCG ACCAGTGCGG CCCCCGGGAT TGTTCAGCAC
ATCAGCGTCC AGGGTACTGC CGACGACGCC ACCTTGGCCC GAATCCAGCA GGCCGCACAA
AAGGGCGCGC AGGATGGCTA CAACCTAGTG CTGCGCGACC TCAAGATGAA CGGGCCGGCG
CGGCAGCTGA TCGCCCGAAA CCGATAG
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| Protein sequence | MSQGDIAVLG IRVESGEAVS AADDLDKLTK AGERAEVATG SVGAQAKSSG VSIKDLAAST
QSTEQAMDRY ARQAQAAGMS TKAYAAALRT VPAQLSDIVV GLQGGQSIMT VALQQGSQLR
DQFGGVGSAA RALGGHLLSL VNPYSVLAAA VAGAGLAYYK GQQEAEEFRK ALILTGNAAG
TNSGALADLS RQISTTVGTT GAAAEVLAQL AGSGKIAGDS FSTVATAALQ MKDATGRAIE
ETIADFVRIG KDPVAAAREL EEQYGFLTAS TYAQIAAMKD QGDTVGAAKL LTDEYARTID
TRSKEIVENL GWIEKAWRGV WGMTKNAGDA ALNFGRTQGI AQQLAAAQAD LADLEKRAGE
NKIVAASAQA KAERELLQSR ITALGDQLKT QQAIDQAQEN YRQRQRDSIL SQETLNGQLR
TTASNQEKLA KRLKEIDELA KKSAVGDGGR VYTEAELNQL RDAAREQFKD KPVHKGPAYR
EDAGTKALDQ ARQQYSVLQQ QNGLIGAQRG EMQKLGEAGQ ALVRWEQQLA DIKDKKTLTA
DQKSLLANQD LITAQLKRNA GLEREMQLRK VATEEAQKLA AFEANLNSQL QRASVGLDNN
LAGMGLGDQA QQRLQERFSI EQQYQQQMDN LLQQRNEGRI SESLYQKENA ALQSALDQRL
AKQGQYYQRV DELQSDWSVG ARAAFGTYLE QARNVAGQTR TLFTNAFSNM EDSIVTFVKT
GKLSFKDFAD GVIEDLIRIQ VRQAAVGFLS TAFGFLGGGS QALGQGTMTG FSEPLKQLST
GGYTGDGGKF EPKGVVHGGE FVLRKEVVAQ PGMRNYLEGL NVRGYASGGF VTPRIASTAT
QMAASQPEAS TSAAPGIVQH ISVQGTADDA TLARIQQAAQ KGAQDGYNLV LRDLKMNGPA
RQLIARNR
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