11 homologs were found in PanDaTox collection
for query gene Glov_1427 on replicon NC_010814
Organism: Geobacter lovleyi SZ



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010814  Glov_1427  CI repressor  100 
 
 
240 aa  490  9.999999999999999e-139  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007964  Nham_1615  hypothetical protein  40.91 
 
 
174 aa  57.4  0.0000002  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_0976  putative phage repressor  35.21 
 
 
284 aa  54.3  0.000002  Geobacter lovleyi SZ  Bacteria  normal  0.786838  n/a   
 
 
-
 
NC_002947  PP_4133  transcriptional regulator-related protein  32.88 
 
 
125 aa  45.4  0.0009  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_1732  bacteriophage CI repressor  36.67 
 
 
125 aa  44.3  0.002  Pseudomonas putida F1  Bacteria  hitchhiker  0.0000144956  normal  0.557146 
 
 
-
 
NC_009784  VIBHAR_05009  hypothetical protein  32.84 
 
 
208 aa  43.9  0.002  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_012560  Avin_04120  transcriptional regulator  33.33 
 
 
129 aa  44.3  0.002  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_3154  CI repressor  27.27 
 
 
285 aa  43.9  0.002  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_007575  Suden_0804  hypothetical protein  32.76 
 
 
236 aa  43.5  0.003  Sulfurimonas denitrificans DSM 1251  Bacteria  decreased coverage  0.00564078  n/a   
 
 
-
 
NC_010322  PputGB1_3705  CI repressor  33.33 
 
 
126 aa  42  0.009  Pseudomonas putida GB-1  Bacteria  normal  0.126263  normal 
 
 
-
 
NC_007575  Suden_1096  putative phage repressor  32.65 
 
 
219 aa  41.6  0.01  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  0.0889323  n/a   
 
 
-
 
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