11 homologs were found in PanDaTox collection
for query gene Dvul_3004 on replicon NC_008741
Organism: Desulfovibrio vulgaris DP4



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008741  Dvul_3004  type III secretion regulator YopN/LcrE/InvE/MxiC  100 
 
 		 374 aa  750    Desulfovibrio vulgaris DP4  Bacteria  normal  0.552336  n/a   
 
 
-
 
NC_011769  DvMF_2419  type III secretion regulator YopN/LcrE/InvE/MxiC  75.21 
 
 		 379 aa  542  1e-153  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  1 
 
 
-
 
NC_012917  PC1_2205  type III secretion regulator YopN/LcrE/InvE/MxiC  24.11 
 
 		 402 aa  68.2  0.0000000002  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_012912  Dd1591_1892  type III secretion regulator YopN/LcrE/InvE/MxiC  25.71 
 
 		 393 aa  67.4  0.0000000003  Dickeya zeae Ech1591  Bacteria  normal  0.545889  n/a   
 
 
-
 
NC_008463  PA14_42550  Type III secretion outer membrane protein PopN precursor  29.75 
 
 		 288 aa  60.8  0.00000004  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  1 
 
 
-
 
NC_002620  TC0364  type III secreted protein SctW  22.57 
 
 		 418 aa  50.8  0.00004  Chlamydia muridarum Nigg  Bacteria  normal  0.0863411  n/a   
 
 
-
 
NC_010157  YpAngola_B0040  type III secretion regulator YopN  21.79 
 
 		 293 aa  50.8  0.00004  Yersinia pestis Angola  Bacteria  hitchhiker  0.00159694  normal  1 
 
 
-
 
NC_009783  VIBHAR_01732  hypothetical protein  30.77 
 
 		 94 aa  48.5  0.0002  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008463  PA14_42540  putative protein in type III secretion  31.08 
 
 		 92 aa  44.7  0.003  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009783  VIBHAR_01731  hypothetical protein  23.17 
 
 		 297 aa  43.9  0.005  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
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NC_013456  VEA_003367  type III secretion regulator YopN  21.61 
 
 		 297 aa  43.1  0.007  Vibrio sp. Ex25  Bacteria  normal  1  n/a   
 
 
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