| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_42550 |
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| Symbol | popN |
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| ID | 4380196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 3786710 |
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| End bp | 3787576 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639325982 |
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| Product | Type III secretion outer membrane protein PopN precursor |
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| Protein accession | YP_791547 |
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| Protein GI | 116049648 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02568] type III secretion regulator YopN/LcrE/InvE/MxiC |
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Plasmid Coverage information |
| Num covering plasmid clones | 51 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 66 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACATCC TCCAGAGTTC CTCCGCCGCG CCCCTCGCGC CGCGGGAAGC GGCCAACGCC
CCCGCGCAGC AGGCTGGCGG CAGCTTTCAG GGCGAGCGCG TCCACTACGT TTCCGTTTCG
CAGTCGCTGG CCGATGCCGC GGAAGAGCTG ACCTTCGCCT TTTCTGAGCG CGCCGAGAAA
TCCCTGGCCA AGCGCCGCCT GAGCGACGCC CATGCGCGCC TGAGCGAAGT CCAGGCCATG
CTGCAGGAGT ACTGGAAGCG CATTCCGGAC CTGGAAAGCC AGCAGAAGCT CGAGGCGCTG
ATCGCCCACC TGGGCAGCGG CCAACTGAGC AGCCTGGCGC AGCTCAGTGC TTACCTGGAG
GGCTTCTCCA GCGAGATCAG CCAGCGCTTC CTGGCGCTGT CGCGGGCGCG CGACGTCCTG
GCCGGGCGGC CGGAGGCGCG GGCGATGCTG GCGCTGGTCG ACCAGGCGTT GCTGCGGATG
GCCGACGAGC AGGGCCTGGA GATCGAACTC GGCCTGCGCA TCGAGCCGCT GGCCGCCGAG
GCTTCCGCCG CCGGTGTCGG CGATATCCAG GCGCTGCGCG ATACCTACCG TGACGCGGTA
CTCGACTACC GGGGCCTGTC GGCGGCCTGG CAGGACATCC AGGCGCGCTT CGCCGCGACG
CCGCTGGAGC GGGTCGTGGC CTTCCTGCAG AAAGCCCTGA GCGCCGACCT GGACAGTCAG
TCGAGCCGGC TCGATCCGGT GAAGCTGGAG CGGGTCATGA GCGACATGCA CAAGCTGCGC
GTGCTCGGCG GCCTGGCGGA GCAGGTGGGG GCGCTCTGGC AGGTGCTGGT GACAGGGGAG
CGGGGCCATG GCATACGGGC CTTCTGA
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| Protein sequence | MDILQSSSAA PLAPREAANA PAQQAGGSFQ GERVHYVSVS QSLADAAEEL TFAFSERAEK
SLAKRRLSDA HARLSEVQAM LQEYWKRIPD LESQQKLEAL IAHLGSGQLS SLAQLSAYLE
GFSSEISQRF LALSRARDVL AGRPEARAML ALVDQALLRM ADEQGLEIEL GLRIEPLAAE
ASAAGVGDIQ ALRDTYRDAV LDYRGLSAAW QDIQARFAAT PLERVVAFLQ KALSADLDSQ
SSRLDPVKLE RVMSDMHKLR VLGGLAEQVG ALWQVLVTGE RGHGIRAF
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