| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003367 |
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| Symbol | |
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| ID | 8557100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 1924547 |
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| End bp | 1925440 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 646406462 |
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| Product | type III secretion regulator YopN |
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| Protein accession | YP_003285992 |
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| Protein GI | 262394138 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02568] type III secretion regulator YopN/LcrE/InvE/MxiC |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTATTA TCAACAATCA TATCGCAACA AACCCAAAGT TTGATGCGTC TATCCAAAAC
GGGTTGGAAT CGTCTCGTAC CGACGCTTCA CGAAAAGGCA ATTACCGCGG TGAAACGGTC
CGTGTTCACA ATGCCACACA ATCACTTTTT GATGCGATGG AAGAGCTCAC TTCACTCGGT
TCCGAAAAAG CAGAAAAAGA TTTGACCAAG CGTAAAGTGA AAGATAGTGG CGTTCGAGTT
AATGAAGCGC ACGAACTCGT TTCTGACTAT CTGCGAAAAG TCCCTGATCT TGAAAAGAAC
CAAAAGATCA AAGATCTGGC TGCAAAAATG GCGGGAGGAA ATATCTCGAC CATCGCTCAA
TTGCAAGCTT ATTTGAATGG ATTTTCAGAG GAGAAAAGCC ATCAATACCT TGCGTTAAAA
GCCGTTAAAA AGTTTTTGAG TTCGAGCCCA GAAAGTAAAC ATCTACTAGC GCTGATTGAC
CAAGCGATTC TGAGAATCGA GCAAAACCCA GATTCTTGGG CTCAAATTGA TACGGAAATT
CGCGTCTCAA ACTTTGCTGA TGAGTACAGC CAAGAGCAAG AGTTTAGCTC ATTACATCAG
CTGCGCGGTT TCTATCGCGA TACCGTTCAT AGCTATCAAG GGCTCGGCGC CGCTTATCAA
GACGTAGTGG CGCGCTTTGG TGAACAGGAG GTATCGACCG CTGTTGACTT TATGCTGCAA
GGCATGAGTG CAGATCTTAG TGTTCAAGGC AGCAGTATCG ACTCGGTTAA GTTGCAGTGG
TTGATGTCCG ATATGCAAAA ACTCAAAACT CTAAATACGT TGCAAGATCG CGTGAGTCAG
CTGTTCCAAA TGTTTAAACC GGAAAGGACG AGTTATGGCT TATCAAGTTT CTAA
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| Protein sequence | MSIINNHIAT NPKFDASIQN GLESSRTDAS RKGNYRGETV RVHNATQSLF DAMEELTSLG
SEKAEKDLTK RKVKDSGVRV NEAHELVSDY LRKVPDLEKN QKIKDLAAKM AGGNISTIAQ
LQAYLNGFSE EKSHQYLALK AVKKFLSSSP ESKHLLALID QAILRIEQNP DSWAQIDTEI
RVSNFADEYS QEQEFSSLHQ LRGFYRDTVH SYQGLGAAYQ DVVARFGEQE VSTAVDFMLQ
GMSADLSVQG SSIDSVKLQW LMSDMQKLKT LNTLQDRVSQ LFQMFKPERT SYGLSSF
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