| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_B0040 |
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| Symbol | yopN |
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| ID | 5798297 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pestis Angola |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010157 |
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| Strand | - |
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| Start bp | 24747 |
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| End bp | 25628 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641337851 |
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| Product | type III secretion regulator YopN |
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| Protein accession | YP_001604471 |
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| Protein GI | 162417778 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02568] type III secretion regulator YopN/LcrE/InvE/MxiC |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 0.00159694 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 82 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACGC TTCATAACCT ATCTTATGGC AATACCCCGC TGCATAATGA GCGTCCAGAG
ATTGCCAGTA GTCAGATCGT AAATCAGACT CTGGGTCAAT TTCGGGGAGA ATCTGTGCAG
ATAGTCAGCG GCACTCTGCA GTCTATAGCT GATATGGCAG AAGAGGTAAC ATTTGTCTTC
TCCGAGCGTA AGGAGCTCTC CCTCGACAAA CGCAAATTAA GTGACAGCCA GGCTCGAGTT
AGCGACGTTG AGGAGCAGGT TAATCAATAC CTTAGCAAAG TTCCAGAGTT GGAACAAAAA
CAGAATGTGA GTGAGCTGCT CAGTCTGTTG AGTAACAGCC CCAATATAAG CTTGTCCCAG
TTAAAGGCTT ATCTGGAGGG GAAATCAGAA GAACCGAGTG AGCAATTCAA AATGCTCTGC
GGCTTGCGTG ATGCCCTGAA AGGGCGCCCT GAATTAGCAC ATCTTTCGCA TTTGGTTGAA
CAAGCTCTGG TCAGCATGGC TGAAGAGCAA GGAGAAACCA TTGTATTGGG TGCCAGGATA
ACCCCGGAAG CGTACAGAGA ATCCCAGTCG GGTGTTAATC CACTGCAGCC GCTCCGTGAT
ACCTACCGCG ATGCAGTGAT GGGTTATCAA GGAATTTATG CGATCTGGAG TGATTTACAA
AAACGTTTTC CTAATGGGGA TATAGACTCG GTGATATTAT TCCTGCAAAA GGCGCTTAGT
GCAGATCTAC AAAGTCAACA AAGCGGGTCT GGACGGGAAA AATTAGGAAT AGTTATTAGT
GACTTACAGA AGCTAAAGGA GTTTGGTAGC GTGAGTGACC AAGTTAAAGG ATTTTGGCAA
TTTTTTTCAG AGGGTAAAAC TAATGGCGTA CGACCTTTCT GA
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| Protein sequence | MTTLHNLSYG NTPLHNERPE IASSQIVNQT LGQFRGESVQ IVSGTLQSIA DMAEEVTFVF
SERKELSLDK RKLSDSQARV SDVEEQVNQY LSKVPELEQK QNVSELLSLL SNSPNISLSQ
LKAYLEGKSE EPSEQFKMLC GLRDALKGRP ELAHLSHLVE QALVSMAEEQ GETIVLGARI
TPEAYRESQS GVNPLQPLRD TYRDAVMGYQ GIYAIWSDLQ KRFPNGDIDS VILFLQKALS
ADLQSQQSGS GREKLGIVIS DLQKLKEFGS VSDQVKGFWQ FFSEGKTNGV RPF
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