7 homologs were found in PanDaTox collection
for query gene VIBHAR_01731 on replicon NC_009783
Organism: Vibrio harveyi ATCC BAA-1116



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009783  VIBHAR_01731  hypothetical protein  100 
 
 
297 aa  609  1e-173  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013456  VEA_003367  type III secretion regulator YopN  85.19 
 
 
297 aa  521  1e-147  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_42550  Type III secretion outer membrane protein PopN precursor  38.38 
 
 
288 aa  205  6e-52  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_010157  YpAngola_B0040  type III secretion regulator YopN  33.58 
 
 
293 aa  151  2e-35  Yersinia pestis Angola  Bacteria  hitchhiker  0.00159694  normal 
 
 
-
 
NC_011769  DvMF_2419  type III secretion regulator YopN/LcrE/InvE/MxiC  23.46 
 
 
379 aa  55.1  0.000001  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_008741  Dvul_3004  type III secretion regulator YopN/LcrE/InvE/MxiC  23.17 
 
 
374 aa  43.9  0.003  Desulfovibrio vulgaris DP4  Bacteria  normal  0.552336  n/a   
 
 
-
 
NC_002620  TC0364  type III secreted protein SctW  26.4 
 
 
418 aa  43.1  0.006  Chlamydia muridarum Nigg  Bacteria  normal  0.0863411  n/a   
 
 
-
 
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