15 homologs were found in PanDaTox collection
for query gene Dole_2397 on replicon NC_009943
Organism: Desulfococcus oleovorans Hxd3



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009943  Dole_2397  hypothetical protein  100 
 
 
270 aa  551  1e-156  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_2398  response regulator receiver protein  28.79 
 
 
271 aa  107  2e-22  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1509  response regulator receiver protein  29.3 
 
 
278 aa  101  1e-20  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00063151  n/a   
 
 
-
 
NC_011146  Gbem_2312  transport-associated  25.19 
 
 
271 aa  76.6  0.0000000000004  Geobacter bemidjiensis Bem  Bacteria  unclonable  0.0000000102264  n/a   
 
 
-
 
NC_008554  Sfum_0654  response regulator receiver protein  26.17 
 
 
413 aa  73.6  0.000000000003  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.113697  normal 
 
 
-
 
NC_012918  GM21_1911  transport-associated protein  25.32 
 
 
271 aa  70.9  0.00000000002  Geobacter sp. M21  Bacteria  n/a    normal  0.551319 
 
 
-
 
NC_009483  Gura_2809  transport-associated protein  24.24 
 
 
273 aa  67  0.0000000003  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.00612028  n/a   
 
 
-
 
NC_010814  Glov_1325  transport-associated protein  23.4 
 
 
275 aa  62.8  0.000000006  Geobacter lovleyi SZ  Bacteria  normal  0.0768925  n/a   
 
 
-
 
NC_008609  Ppro_0661  transport-associated  23.61 
 
 
275 aa  62  0.00000001  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_0328  response regulator receiver domain-containing protein  24.9 
 
 
406 aa  60.5  0.00000003  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.918345  n/a   
 
 
-
 
NC_007517  Gmet_1979  transport-associated protein  23.11 
 
 
273 aa  53.9  0.000002  Geobacter metallireducens GS-15  Bacteria  decreased coverage  0.000154767  normal  0.0601452 
 
 
-
 
NC_009943  Dole_2335  response regulator receiver protein  25.63 
 
 
411 aa  54.7  0.000002  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.0000388714  n/a   
 
 
-
 
NC_012791  Vapar_4490  transport-associated  24.81 
 
 
278 aa  50.1  0.00004  Variovorax paradoxus S110  Bacteria  normal  0.947907  n/a   
 
 
-
 
NC_002939  GSU1925  transport-associated domain-containing protein  24.71 
 
 
273 aa  49.7  0.00005  Geobacter sulfurreducens PCA  Bacteria  normal  0.237586  n/a   
 
 
-
 
NC_007948  Bpro_2798  transport-associated  32.43 
 
 
277 aa  45.4  0.001  Polaromonas sp. JS666  Bacteria  normal  0.549341  normal  0.297998 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>