Gene Dole_1509 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_1509 
Symbol 
ID5694346 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp1801382 
End bp1802218 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content58% 
IMG OID641264104 
Productresponse regulator receiver protein 
Protein accessionYP_001529390 
Protein GI158521520 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1102] Cytidylate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00063151 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGTTA TTACCATTTC ACGAGGCTCT TACAGCCGGG GCAAAGAGGT CGCCGAGAAG 
GTGGCCGAAA AACTGGGGTA TGCGTGCATC TCCAGGGATA TCCTGCTGGA GGCGTCCGAG
GCGTTCAATA TTCCGGAGAT CAAGCTGGTC CGGGCCATTC ACGACGCCCC GTCGGTCCTG
GAACGCTTCA CCCACGGCCA GGAACGGTAC ATCAGTTATA TTCGAAAGGT GCTGCTGCAT
CACGTTCAGA AGGACAACGT AGTCTACCAC GGACTGGCCG GCCACTTTTT TCTGTTAAAT
ATTCCCCATG TTTTAAAGGT CCGGATTATC GCGGATATGG AGGACCGGGT GGCGGAAGAA
ATGGCCAGGG AAAAAATTCC GGAAGACAAG GCCCGCTACC TTTTAAAGAA GGATGATGAC
GAGCGTCGCA AGTGGGGGCT TCAGCTTTAC GGCATTGACA CCTGGGACAG CCAGCTTTAC
GACATGGTGC TGCACATCAA GACCCTGACC GCGGACGATG CCGTGGACCT CATTGTTCAG
ACCGCCGGCA AGCCGGTGCT TCAGACCACG GCCCGGTCCC AGGCCCTTGT GGACGACCTG
GCCCTGGCCG CCACGGTGCA GGCTGAACTG GTGAAGGTGG CGCCCCGGCT GGAGGTGACG
GCCGACAACG GGGTGGTGCG CGTCGGTGAC ATGGACGGGA CCCTTTCCGT GAAACAGGGC
GTGGCTGATG AGATTCGCCG GATCGCAGGC CAGGTGGACG GTGTAAAAGA GGTCCTGCTG
CTTGCGCCTG AAAAACCGGA AGGATACGGT TCGGTCAACC CCTTTCATAA GTTATAA
 
Protein sequence
MSVITISRGS YSRGKEVAEK VAEKLGYACI SRDILLEASE AFNIPEIKLV RAIHDAPSVL 
ERFTHGQERY ISYIRKVLLH HVQKDNVVYH GLAGHFFLLN IPHVLKVRII ADMEDRVAEE
MAREKIPEDK ARYLLKKDDD ERRKWGLQLY GIDTWDSQLY DMVLHIKTLT ADDAVDLIVQ
TAGKPVLQTT ARSQALVDDL ALAATVQAEL VKVAPRLEVT ADNGVVRVGD MDGTLSVKQG
VADEIRRIAG QVDGVKEVLL LAPEKPEGYG SVNPFHKL