More than 300 homologs were found in PanDaTox collection
for query gene BBta_1981 on replicon NC_009485
Organism: Bradyrhizobium sp. BTAi1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009485  BBta_1981  putative acyl-CoA dehydrogenase  100 
 
 
388 aa  773    Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_3226  acyl-CoA dehydrogenase-related protein  57.46 
 
 
380 aa  424  1e-117  Pseudomonas putida KT2440  Bacteria  normal  0.690171  normal 
 
 
-
 
NC_010322  PputGB1_2538  acyl-CoA dehydrogenase type 2  56.45 
 
 
378 aa  419  1e-116  Pseudomonas putida GB-1  Bacteria  normal  0.844573  decreased coverage  0.00557828 
 
 
-
 
NC_007005  Psyr_3604  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  56.59 
 
 
393 aa  419  1e-116  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.339437 
 
 
-
 
NC_012560  Avin_21570  Acyl-CoA dehydrogenase family protein  59.1 
 
 
400 aa  405  1.0000000000000001e-112  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_1790  acyl-CoA dehydrogenase family protein  57.14 
 
 
397 aa  402  1e-111  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_2659  acyl-CoA dehydrogenase type 2  56.59 
 
 
390 aa  403  1e-111  Caulobacter sp. K31  Bacteria  normal  normal  0.387509 
 
 
-
 
NC_012560  Avin_31100  Acyl-CoA dehydrogenase family protein  55.19 
 
 
396 aa  394  1e-108  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_010581  Bind_0523  acyl-CoA dehydrogenase type 2  54.23 
 
 
407 aa  380  1e-104  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_3873  Acyl-CoA dehydrogenase type 2 domain protein  53.59 
 
 
411 aa  372  1e-102  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_012857  Rpic12D_4596  Acyl-CoA dehydrogenase type 2 domain protein  50.91 
 
 
402 aa  369  1e-101  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_4462  Acyl-CoA dehydrogenase type 2 domain  50.91 
 
 
402 aa  369  1e-101  Ralstonia pickettii 12J  Bacteria  normal  normal  0.542965 
 
 
-
 
NC_013510  Tcur_1390  Acyl-CoA dehydrogenase type 2 domain protein  54.78 
 
 
384 aa  370  1e-101  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00428618  n/a   
 
 
-
 
NC_008391  Bamb_3681  acyl-CoA dehydrogenase domain-containing protein  52.22 
 
 
442 aa  364  1e-99  Burkholderia ambifaria AMMD  Bacteria  normal  0.902105  normal 
 
 
-
 
NC_010552  BamMC406_4154  acyl-CoA dehydrogenase domain-containing protein  51.96 
 
 
440 aa  364  2e-99  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.233252 
 
 
-
 
NC_007973  Rmet_2217  Acyl-CoA dehydrogenase  52.32 
 
 
402 aa  364  2e-99  Cupriavidus metallidurans CH34  Bacteria  normal  0.0777616  normal  0.101595 
 
 
-
 
NC_008463  PA14_30500  putative acyl-CoA dehydrogenase  56.49 
 
 
383 aa  360  2e-98  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B5046  Acyl-CoA dehydrogenase, C-terminal  52.49 
 
 
402 aa  357  1.9999999999999998e-97  Ralstonia eutropha JMP134  Bacteria  normal  0.721222  n/a   
 
 
-
 
NC_011666  Msil_2670  Acyl-CoA dehydrogenase type 2 domain protein  52.47 
 
 
389 aa  355  6.999999999999999e-97  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_010515  Bcenmc03_3260  acyl-CoA dehydrogenase domain-containing protein  51.83 
 
 
459 aa  353  2.9999999999999997e-96  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B1754  Acyl-CoA dehydrogenase  52.29 
 
 
454 aa  346  5e-94  Burkholderia sp. 383  Bacteria  normal  normal  0.0688656 
 
 
-
 
NC_008061  Bcen_4109  Acyl-CoA dehydrogenase, type 2-like  52.02 
 
 
452 aa  343  2e-93  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.381793  n/a   
 
 
-
 
NC_008543  Bcen2424_4257  acyl-CoA dehydrogenase type 2  52.02 
 
 
452 aa  343  2e-93  Burkholderia cenocepacia HI2424  Bacteria  hitchhiker  0.00125865  normal  0.295507 
 
 
-
 
NC_010086  Bmul_4333  acyl-CoA dehydrogenase type 2  50.13 
 
 
440 aa  339  5.9999999999999996e-92  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.619225  normal  0.220534 
 
 
-
 
NC_010725  Mpop_4897  acyl-CoA dehydrogenase domain protein  52.13 
 
 
381 aa  337  2.9999999999999997e-91  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_008688  Pden_5014  acyl-CoA dehydrogenase type 2  50.27 
 
 
384 aa  335  1e-90  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_1330  acyl-CoA dehydrogenase domain protein  49.47 
 
 
381 aa  319  3.9999999999999996e-86  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.135454  normal  0.523473 
 
 
-
 
NC_010172  Mext_1170  acyl-CoA dehydrogenase domain-containing protein  49.2 
 
 
381 aa  319  3.9999999999999996e-86  Methylobacterium extorquens PA1  Bacteria  normal  0.665446  normal  0.0188326 
 
 
-
 
NC_009485  BBta_3307  putative acyl-CoA dehydrogenase  51.38 
 
 
394 aa  318  2e-85  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_5139  putative acyl-CoA dehydrogenase  45.55 
 
 
399 aa  313  2.9999999999999996e-84  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0630041 
 
 
-
 
NC_013131  Caci_2770  ccyl-CoA dehydrogenase type 2 domain protein  45.87 
 
 
406 aa  303  3.0000000000000004e-81  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.271017  normal 
 
 
-
 
NC_010581  Bind_1847  acyl-CoA dehydrogenase type 2  43.16 
 
 
382 aa  290  3e-77  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.25699  normal 
 
 
-
 
NC_010505  Mrad2831_4840  acyl-CoA dehydrogenase type 2  51.17 
 
 
381 aa  280  4e-74  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.910203 
 
 
-
 
NC_009921  Franean1_2020  acyl-CoA dehydrogenase type 2  42.78 
 
 
394 aa  276  3e-73  Frankia sp. EAN1pec  Bacteria  normal  0.692035  normal  0.294025 
 
 
-
 
NC_009621  Smed_5653  acyl-CoA dehydrogenase type 2  43.18 
 
 
410 aa  275  1.0000000000000001e-72  Sinorhizobium medicae WSM419  Bacteria  normal  0.329683  normal  0.865966 
 
 
-
 
NC_009921  Franean1_3756  acyl-CoA dehydrogenase type 2  41.71 
 
 
418 aa  255  1.0000000000000001e-66  Frankia sp. EAN1pec  Bacteria  normal  0.326681  normal 
 
 
-
 
NC_009485  BBta_2584  putative acyl-CoA dehydrogenase  39.77 
 
 
398 aa  250  3e-65  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0375347 
 
 
-
 
NC_011981  Avi_7179  acyl-CoA dehydrogenase  41.21 
 
 
394 aa  249  7e-65  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011988  Avi_5178  acyl-CoA dehydrogenase-related protein  41.3 
 
 
393 aa  246  4e-64  Agrobacterium vitis S4  Bacteria  normal  0.897204  n/a   
 
 
-
 
NC_009523  RoseRS_0478  acyl-CoA dehydrogenase domain-containing protein  39.79 
 
 
396 aa  229  7e-59  Roseiflexus sp. RS-1  Bacteria  normal  0.859047  normal 
 
 
-
 
NC_013093  Amir_4313  acyl-CoA dehydrogenase type 2 domain protein  40.85 
 
 
397 aa  228  1e-58  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_0150  acyl-CoA dehydrogenase domain-containing protein  36.24 
 
 
394 aa  218  1e-55  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_013525  Tter_1183  Acyl-CoA dehydrogenase type 2 domain protein  34.68 
 
 
390 aa  217  2.9999999999999998e-55  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_007777  Francci3_2419  Acyl-CoA dehydrogenase  41.14 
 
 
332 aa  209  5e-53  Frankia sp. CcI3  Bacteria  normal  0.238624  normal  0.291589 
 
 
-
 
NC_013205  Aaci_0955  Acyl-CoA dehydrogenase type 2 domain protein  37.12 
 
 
398 aa  186  8e-46  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_009632  SaurJH1_2352  acyl-CoA dehydrogenase type 2  30.19 
 
 
384 aa  169  9e-41  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.657423  n/a   
 
 
-
 
NC_009487  SaurJH9_2310  acyl-CoA dehydrogenase type 2  30.19 
 
 
384 aa  169  9e-41  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.154104  n/a   
 
 
-
 
NC_003909  BCE_3126  acyl-CoA dehydrogenase, short-chain specific, putative  30.4 
 
 
382 aa  161  2e-38  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.00757934  n/a   
 
 
-
 
NC_010184  BcerKBAB4_2881  acyl-CoA dehydrogenase type 2  29.22 
 
 
382 aa  160  2e-38  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.255861  n/a   
 
 
-
 
NC_009674  Bcer98_2066  acyl-CoA dehydrogenase type 2  30.05 
 
 
384 aa  160  2e-38  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.335702  n/a   
 
 
-
 
NC_011773  BCAH820_3109  putative acyl-CoA dehydrogenase, short-chain specific  30.29 
 
 
382 aa  161  2e-38  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_011772  BCG9842_B2142  putative acyl-CoA dehydrogenase, short-chain specific  30.29 
 
 
382 aa  160  4e-38  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_002976  SERP1866  acyl-CoA dehydrogenase-related protein  30.21 
 
 
381 aa  159  7e-38  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_2857  acyl-CoA dehydrogenase, short-chain specific  30.03 
 
 
382 aa  159  8e-38  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.25076  n/a   
 
 
-
 
NC_011658  BCAH187_A3128  putative acyl-CoA dehydrogenase, short-chain specific  30.03 
 
 
382 aa  159  9e-38  Bacillus cereus AH187  Bacteria  hitchhiker  0.000407188  n/a   
 
 
-
 
NC_006274  BCZK2818  acyl-CoA dehydrogenase, short-chain specific  30.03 
 
 
382 aa  159  1e-37  Bacillus cereus E33L  Bacteria  normal  0.149479  n/a   
 
 
-
 
NC_011725  BCB4264_A3094  putative acyl-CoA dehydrogenase, short-chain specific  29.76 
 
 
382 aa  158  1e-37  Bacillus cereus B4264  Bacteria  normal  0.952201  n/a   
 
 
-
 
NC_005945  BAS2889  acyl-CoA dehydrogenase, short-chain specific  30.03 
 
 
382 aa  158  2e-37  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.00742766  n/a   
 
 
-
 
NC_007530  GBAA_3105  acyl-CoA dehydrogenase, short-chain specific  30.03 
 
 
382 aa  158  2e-37  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.362062  n/a   
 
 
-
 
NC_012793  GWCH70_1626  Acyl-CoA dehydrogenase type 2 domain protein  31.37 
 
 
387 aa  152  8.999999999999999e-36  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_008025  Dgeo_1231  Acyl-CoA dehydrogenase, type 2-like protein  38.04 
 
 
384 aa  146  7.0000000000000006e-34  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.279686  normal 
 
 
-
 
NC_013411  GYMC61_2547  Acyl-CoA dehydrogenase type 2 domain protein  31.28 
 
 
392 aa  143  4e-33  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009972  Haur_2304  acyl-CoA dehydrogenase type 2  33.33 
 
 
392 aa  137  3.0000000000000003e-31  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.0799931  n/a   
 
 
-
 
NC_009953  Sare_4695  acyl-CoA dehydrogenase type 2  33.24 
 
 
387 aa  119  7e-26  Salinispora arenicola CNS-205  Bacteria  normal  0.46169  normal  0.258533 
 
 
-
 
NC_009380  Strop_4265  acyl-CoA dehydrogenase type 2  32.41 
 
 
387 aa  113  4.0000000000000004e-24  Salinispora tropica CNB-440  Bacteria  normal  normal  0.184931 
 
 
-
 
NC_008254  Meso_2091  Acyl-CoA dehydrogenase, type 2-like  29.33 
 
 
389 aa  112  1.0000000000000001e-23  Chelativorans sp. BNC1  Bacteria  normal  0.424709  n/a   
 
 
-
 
NC_011884  Cyan7425_1173  Acyl-CoA dehydrogenase type 2 domain protein  27.23 
 
 
383 aa  109  8.000000000000001e-23  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_008025  Dgeo_1179  acyl-CoA dehydrogenase-like protein  28.96 
 
 
392 aa  107  3e-22  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_0146  Acyl-CoA dehydrogenase type 2 domain-containing protein  29.05 
 
 
382 aa  106  7e-22  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.658373 
 
 
-
 
NC_013159  Svir_20400  acyl-CoA dehydrogenase  31.32 
 
 
396 aa  105  9e-22  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.170444  normal 
 
 
-
 
NC_013440  Hoch_3775  acyl-CoA dehydrogenase domain protein  29.33 
 
 
386 aa  105  1e-21  Haliangium ochraceum DSM 14365  Bacteria  normal  0.212433  normal  0.155443 
 
 
-
 
NC_013739  Cwoe_2677  Acyl-CoA dehydrogenase type 2 domain protein  36.27 
 
 
433 aa  101  2e-20  Conexibacter woesei DSM 14684  Bacteria  normal  0.3001  normal  0.883174 
 
 
-
 
NC_010501  PputW619_4988  acyl-CoA dehydrogenase type 2  29.2 
 
 
413 aa  95.1  2e-18  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_013743  Htur_2576  acyl-CoA dehydrogenase domain protein  30.11 
 
 
378 aa  94.7  3e-18  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_013124  Afer_0732  acyl-CoA dehydrogenase domain protein  26.54 
 
 
379 aa  94  4e-18  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2572  putative acyl-CoA dehydrogenase  35.27 
 
 
393 aa  93.6  5e-18  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.275239 
 
 
-
 
NC_011830  Dhaf_2863  acyl-CoA dehydrogenase domain protein  27.53 
 
 
380 aa  93.6  6e-18  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_2056  acyl-CoA dehydrogenase domain protein  27.2 
 
 
377 aa  93.2  7e-18  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.232194  n/a   
 
 
-
 
NC_011004  Rpal_1551  acyl-CoA dehydrogenase domain protein  29.01 
 
 
374 aa  91.7  2e-17  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_1370  Acyl-CoA dehydrogenase type 2 domain protein  33.18 
 
 
395 aa  91.7  2e-17  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_010552  BamMC406_3521  acyl-CoA dehydrogenase type 2  29.05 
 
 
397 aa  92  2e-17  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.0664779 
 
 
-
 
NC_011831  Cagg_0202  acyl-CoA dehydrogenase domain protein  27.78 
 
 
382 aa  91.3  3e-17  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.221874  normal 
 
 
-
 
NC_010322  PputGB1_0248  acyl-CoA dehydrogenase type 2  35.27 
 
 
413 aa  90.5  5e-17  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_007650  BTH_II1742  acyl-CoA dehydrogenase domain-containing protein  28.93 
 
 
412 aa  89  1e-16  Burkholderia thailandensis E264  Bacteria  normal  0.469598  n/a   
 
 
-
 
NC_008463  PA14_34300  DszC family monooxygenase  31.66 
 
 
405 aa  89  1e-16  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.803163  normal  0.0145718 
 
 
-
 
NC_013595  Sros_6601  Acyl-CoA dehydrogenase-like protein  29.35 
 
 
425 aa  89.4  1e-16  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0223249  normal  0.275726 
 
 
-
 
NC_013202  Hmuk_2082  acyl-CoA dehydrogenase domain protein  25.85 
 
 
376 aa  88.2  2e-16  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal 
 
 
-
 
NC_008146  Mmcs_0889  Acyl-CoA dehydrogenase, type 2-like protein  34.26 
 
 
398 aa  88.2  2e-16  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_2355  acyl-CoA dehydrogenase domain-containing protein  26.91 
 
 
381 aa  88.2  2e-16  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.774843  n/a   
 
 
-
 
NC_008705  Mkms_0906  acyl-CoA dehydrogenase type 2  34.26 
 
 
398 aa  88.2  2e-16  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_0895  acyl-CoA dehydrogenase type 2  34.26 
 
 
398 aa  88.2  2e-16  Mycobacterium sp. JLS  Bacteria  normal  normal  0.0424541 
 
 
-
 
NC_008391  Bamb_5351  acyl-CoA dehydrogenase type 2  28.31 
 
 
397 aa  87.8  3e-16  Burkholderia ambifaria AMMD  Bacteria  normal  0.901542  normal  0.800296 
 
 
-
 
NC_010581  Bind_1853  acyl-CoA dehydrogenase type 2  26.39 
 
 
416 aa  87.8  3e-16  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_011891  A2cp1_2282  acyl-CoA dehydrogenase domain protein  29.57 
 
 
389 aa  87.4  4e-16  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_1436  acyl-CoA dehydrogenase domain protein  26.06 
 
 
415 aa  87.4  4e-16  Rhodothermus marinus DSM 4252  Bacteria  normal  0.549354  n/a   
 
 
-
 
NC_011145  AnaeK_2193  acyl-CoA dehydrogenase domain protein  29.73 
 
 
382 aa  87  5e-16  Anaeromyxobacter sp. K  Bacteria  normal  0.918821  n/a   
 
 
-
 
NC_002947  PP_0224  DszC family monooxygenase  34.82 
 
 
413 aa  87  5e-16  Pseudomonas putida KT2440  Bacteria  normal  0.88641  hitchhiker  0.00688358 
 
 
-
 
NC_007511  Bcep18194_B2500  Acyl-CoA dehydrogenase-like  27.15 
 
 
397 aa  86.7  7e-16  Burkholderia sp. 383  Bacteria  normal  0.284322  normal 
 
 
-
 
NC_009512  Pput_0239  acyl-CoA dehydrogenase type 2  34.82 
 
 
413 aa  86.7  7e-16  Pseudomonas putida F1  Bacteria  normal  normal  0.238794 
 
 
-
 
NC_010086  Bmul_5083  acyl-CoA dehydrogenase type 2  28.28 
 
 
397 aa  86.3  9e-16  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.267797 
 
 
-
 
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