Gene BamMC406_3521 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_3521 
Symbol 
ID6181378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp449187 
End bp450380 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content73% 
IMG OID641683290 
Productacyl-CoA dehydrogenase type 2 
Protein accessionYP_001810204 
Protein GI172062553 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0664779 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAACG CCGCCCTCGC CATCGACGCC GCGTCCCCCC CGCCGCACGC GGTCCGTGAA 
GCGGCCGCGC GGGTGTCGCC GCTCGACGCC GTGATCGAGG CCGTCGCCGC GCGCCGCGAC
GAATTCGACC GCCTGTCGCA CGTGCCGCGC GACGTGATCG CGCTGTTCAA GGAAGCCGGC
ATCTATCGCG CGGGCACGCC GCGCCGCTTC GGCGGCGACG CGCTCGCGCC CGGCGCGTTC
CTCGACATGA TCGAGCGGAT CGCGACCGCC GACGGCTCAG CCGCGTGGGT CGCGAGCTTC
GGCTCGGCCA ACGTCTATCT CGCCGCGCTG CCGCTCGCCA CGCAGGCCGA GCTGTACGCG
GGCGGCCCCG ACCAGGTGTT CGCGGGCGGG CTGTTCCCGG TGCAGCCGGC GCAGGCGGTC
CCCGGCGGCT GGCGCGTGAA CGGCACGTGG AAGTTCGCGA GCGGCTGCAA GGGCGCCGAC
TGGCTCGGCG TCGGCATCGC GGTGCCCGGC GCGCAGGACG CCGCGCCGAA CAAGCCGCGC
ACGGCCGTGT TCCGTGCCGC CGACGTCGAG ATCGTCGAGA ACTGGAGCGT GGTCGGCATG
CAGGGCACCG GCAGCCACGA CCTGCGCGTC GACGATCGCT TCGTGCCCGA AGCGTGGACC
TTCGTGCGCG GCGGCGAGGC GACCGTCGAC GAGCCGCTGT ACCGCTATCC GACCGTCGCG
TATGCGGCGC AGGTGCTCGC CGTGGTCAAC CTCGGGCTGG CCCGCGCGGC GCTCGACGTC
GCGAACCGGA TGTCTGGCGG CCGCCAGACG ACCACCGGCG CGCCGCGCCT CGCCGATCGC
GCGTATTTCC GCATCGAGCT CGCGAAGGCC GAGGCGCAGT TGCGCTCGGC GCGCGCGTTC
TTCTACGACG CGACCGACTC GGTCTGGCAA TCGGTCCTCG CGGGAAACCC CGTCACGCCC
GAGCAGGTCA GCCTGCTGAG GCTCGCCGCC ACGCACATCG CCCGCGAAGG CGCGAGCGTC
GTCGAGCGCG CGTATCGCCT CGGCGGCACG GCCGCGATCT ATCGCACGCA TCCGCTGCAG
CGCCTGCTGC GCGACGCGAT GGTCGTCACG CAGCACGCGT TTCTCGGCGA AGGCAACTTC
GACGGCGCGG GCGCGGTGTT CACCGGCGTC GCGCCGTTTC CCGGCTATCT GTAA
 
Protein sequence
MPNAALAIDA ASPPPHAVRE AAARVSPLDA VIEAVAARRD EFDRLSHVPR DVIALFKEAG 
IYRAGTPRRF GGDALAPGAF LDMIERIATA DGSAAWVASF GSANVYLAAL PLATQAELYA
GGPDQVFAGG LFPVQPAQAV PGGWRVNGTW KFASGCKGAD WLGVGIAVPG AQDAAPNKPR
TAVFRAADVE IVENWSVVGM QGTGSHDLRV DDRFVPEAWT FVRGGEATVD EPLYRYPTVA
YAAQVLAVVN LGLARAALDV ANRMSGGRQT TTGAPRLADR AYFRIELAKA EAQLRSARAF
FYDATDSVWQ SVLAGNPVTP EQVSLLRLAA THIAREGASV VERAYRLGGT AAIYRTHPLQ
RLLRDAMVVT QHAFLGEGNF DGAGAVFTGV APFPGYL