Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_3521 |
Symbol | |
ID | 6181378 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | - |
Start bp | 449187 |
End bp | 450380 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641683290 |
Product | acyl-CoA dehydrogenase type 2 |
Protein accession | YP_001810204 |
Protein GI | 172062553 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0664779 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCAACG CCGCCCTCGC CATCGACGCC GCGTCCCCCC CGCCGCACGC GGTCCGTGAA GCGGCCGCGC GGGTGTCGCC GCTCGACGCC GTGATCGAGG CCGTCGCCGC GCGCCGCGAC GAATTCGACC GCCTGTCGCA CGTGCCGCGC GACGTGATCG CGCTGTTCAA GGAAGCCGGC ATCTATCGCG CGGGCACGCC GCGCCGCTTC GGCGGCGACG CGCTCGCGCC CGGCGCGTTC CTCGACATGA TCGAGCGGAT CGCGACCGCC GACGGCTCAG CCGCGTGGGT CGCGAGCTTC GGCTCGGCCA ACGTCTATCT CGCCGCGCTG CCGCTCGCCA CGCAGGCCGA GCTGTACGCG GGCGGCCCCG ACCAGGTGTT CGCGGGCGGG CTGTTCCCGG TGCAGCCGGC GCAGGCGGTC CCCGGCGGCT GGCGCGTGAA CGGCACGTGG AAGTTCGCGA GCGGCTGCAA GGGCGCCGAC TGGCTCGGCG TCGGCATCGC GGTGCCCGGC GCGCAGGACG CCGCGCCGAA CAAGCCGCGC ACGGCCGTGT TCCGTGCCGC CGACGTCGAG ATCGTCGAGA ACTGGAGCGT GGTCGGCATG CAGGGCACCG GCAGCCACGA CCTGCGCGTC GACGATCGCT TCGTGCCCGA AGCGTGGACC TTCGTGCGCG GCGGCGAGGC GACCGTCGAC GAGCCGCTGT ACCGCTATCC GACCGTCGCG TATGCGGCGC AGGTGCTCGC CGTGGTCAAC CTCGGGCTGG CCCGCGCGGC GCTCGACGTC GCGAACCGGA TGTCTGGCGG CCGCCAGACG ACCACCGGCG CGCCGCGCCT CGCCGATCGC GCGTATTTCC GCATCGAGCT CGCGAAGGCC GAGGCGCAGT TGCGCTCGGC GCGCGCGTTC TTCTACGACG CGACCGACTC GGTCTGGCAA TCGGTCCTCG CGGGAAACCC CGTCACGCCC GAGCAGGTCA GCCTGCTGAG GCTCGCCGCC ACGCACATCG CCCGCGAAGG CGCGAGCGTC GTCGAGCGCG CGTATCGCCT CGGCGGCACG GCCGCGATCT ATCGCACGCA TCCGCTGCAG CGCCTGCTGC GCGACGCGAT GGTCGTCACG CAGCACGCGT TTCTCGGCGA AGGCAACTTC GACGGCGCGG GCGCGGTGTT CACCGGCGTC GCGCCGTTTC CCGGCTATCT GTAA
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Protein sequence | MPNAALAIDA ASPPPHAVRE AAARVSPLDA VIEAVAARRD EFDRLSHVPR DVIALFKEAG IYRAGTPRRF GGDALAPGAF LDMIERIATA DGSAAWVASF GSANVYLAAL PLATQAELYA GGPDQVFAGG LFPVQPAQAV PGGWRVNGTW KFASGCKGAD WLGVGIAVPG AQDAAPNKPR TAVFRAADVE IVENWSVVGM QGTGSHDLRV DDRFVPEAWT FVRGGEATVD EPLYRYPTVA YAAQVLAVVN LGLARAALDV ANRMSGGRQT TTGAPRLADR AYFRIELAKA EAQLRSARAF FYDATDSVWQ SVLAGNPVTP EQVSLLRLAA THIAREGASV VERAYRLGGT AAIYRTHPLQ RLLRDAMVVT QHAFLGEGNF DGAGAVFTGV APFPGYL
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