Gene BBta_2572 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_2572 
Symbol 
ID5154198 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp2661872 
End bp2663053 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content68% 
IMG OID640557480 
Productputative acyl-CoA dehydrogenase 
Protein accessionYP_001238634 
Protein GI148254049 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.275239 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCACGGA TTGCCTCCGA CGCCGAGGCG TTGGAGACCG CCCGCGCGCT CGCCAAGGAA 
TTTGCAGCGG AGGCGGTGGC CCGCGATCTG GATCGCCGCC TGCCGTGGGA CGAGATCGAG
CGCTTCACCG CAAGCGGGCT GTGGGCCATC ACCGTTCCCT CAGCGTATGG CGGAACGGAT
GTGAAGTCCG CGACGGCGGC GCGGGTCATT GCGTTGATCT CGGCGGCCGA CGGTTCGCTT
GGGCAAATCC CGCAGAACCA CTTCTATTCG CTCGAGGTGC TGCGCAACGG CGGCACCGAC
GCGCAGAAGC GCTTCTTCTA CGGACAGGTT CTGGCCGGCG CCCGGCTCGG CAATGCGCTG
GCCGAGATCG GGACGCGCGA TTACAAGCGG CACACGCGGC TCGTTCGTGA TCCTGCCGGC
TGGTATGTCG AAGGACGCAA ATTCTACTGC ACGGGTGCGC TGTTCGCCCA TTGGATTCCG
ACCATGGCGA ACGCCGAGGA GGACGGCCGG GAGGTCGCCT ATCTCGTGTT CATCCCCCGC
GATGCCGCGG GCGTGACGGT TGTCGATGAT TGGGACGGCT TTGGTCAGCG CGTGACCGGG
TCGGGTTCGG TGCTGCTCGA CCGGGTGAAG GTGGAGCCGG ACTGGGTCGT GCCGTTCCAG
GCCTCGCTTG ATCGGCCGAC CGCGATCGGT CCTTTCGCGC AGATTCTTCA CGCCGGCATC
GACCTCGGGA TCGGGCAGGG CGCCTTCGCG GCCATGCTGC CGTTCCTGCG ATCGAGGGCG
CGGGCCTGGA TCGACGCCAA GGTCGAGCGC GCCGCAGAGG ACCCGCTGAC GCTTCACGCG
GTCGGCGACG TGCGTGTCCG TCTCGCGGCG GCTGATGCGC TCCTCGACCG TGCCGGGCGT
TTTGTCGACA CGGCGCAAGC CGTACCTGAT GAAGCGAGCG TGGCCGCGGC CTCGATCGCC
GTCGCCGAAG CGCGCGCCGC GAGCCATCGG GCCGGGCTGC TTGCCGCCAA CAAGCTGCTT
GAGCTTGGCG GCACGTCGGC CACCAACCGC GCGGATGATC TCGACCGCTA CTGGCGCAAC
GTCCGCACCC ATACGCTGCA TGATCCGGTG CGCTGGAAAT ATCATTGGAT CGGCCAATAC
CACCTCAACG GCCGGATTCC GCCCCGGCAC GGAGCCCTCT GA
 
Protein sequence
MPRIASDAEA LETARALAKE FAAEAVARDL DRRLPWDEIE RFTASGLWAI TVPSAYGGTD 
VKSATAARVI ALISAADGSL GQIPQNHFYS LEVLRNGGTD AQKRFFYGQV LAGARLGNAL
AEIGTRDYKR HTRLVRDPAG WYVEGRKFYC TGALFAHWIP TMANAEEDGR EVAYLVFIPR
DAAGVTVVDD WDGFGQRVTG SGSVLLDRVK VEPDWVVPFQ ASLDRPTAIG PFAQILHAGI
DLGIGQGAFA AMLPFLRSRA RAWIDAKVER AAEDPLTLHA VGDVRVRLAA ADALLDRAGR
FVDTAQAVPD EASVAAASIA VAEARAASHR AGLLAANKLL ELGGTSATNR ADDLDRYWRN
VRTHTLHDPV RWKYHWIGQY HLNGRIPPRH GAL