More than 300 homologs were found in PanDaTox collection
for query gene Sked_27710 on replicon NC_013521
Organism: Sanguibacter keddieii DSM 10542



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013521  Sked_27710  ABC-type sugar transport system, permease component  100 
 
 
309 aa  618  1e-176  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.935575  normal  0.331014 
 
 
-
 
NC_013526  Tter_2216  binding-protein-dependent transport systems inner membrane component  37.3 
 
 
301 aa  209  6e-53  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2522  binding-protein-dependent transport systems inner membrane component  39.69 
 
 
297 aa  206  4e-52  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00000000227991  n/a   
 
 
-
 
NC_013526  Tter_2507  binding-protein-dependent transport systems inner membrane component  43.2 
 
 
296 aa  205  7e-52  Thermobaculum terrenum ATCC BAA-798  Bacteria  decreased coverage  0.00000371485  n/a   
 
 
-
 
NC_010320  Teth514_1101  binding-protein-dependent transport systems inner membrane component  38.81 
 
 
280 aa  196  4.0000000000000005e-49  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2135  binding-protein-dependent transport systems inner membrane component  40.31 
 
 
296 aa  194  1e-48  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_0515  binding-protein-dependent transport systems inner membrane component  38.17 
 
 
302 aa  194  1e-48  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_4017  binding-protein-dependent transport systems inner membrane component  39.8 
 
 
292 aa  193  3e-48  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.924355  normal 
 
 
-
 
NC_012850  Rleg_4346  binding-protein-dependent transport systems inner membrane component  39.46 
 
 
292 aa  193  3e-48  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  hitchhiker  0.0000934569 
 
 
-
 
NC_009523  RoseRS_3620  binding-protein-dependent transport systems inner membrane component  37.4 
 
 
302 aa  193  4e-48  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013525  Tter_0264  binding-protein-dependent transport systems inner membrane component  35.76 
 
 
307 aa  191  9e-48  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009636  Smed_3327  binding-protein-dependent transport systems inner membrane component  39.7 
 
 
295 aa  191  2e-47  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.925961 
 
 
-
 
NC_009523  RoseRS_1358  binding-protein-dependent transport systems inner membrane component  36.5 
 
 
291 aa  189  5e-47  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_3791  binding-protein-dependent transport systems inner membrane component  36.15 
 
 
300 aa  188  9e-47  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.17142  normal 
 
 
-
 
NC_013526  Tter_2452  binding-protein-dependent transport systems inner membrane component  39.19 
 
 
299 aa  188  1e-46  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.0352539  n/a   
 
 
-
 
NC_013131  Caci_3806  binding-protein-dependent transport systems inner membrane component  36.18 
 
 
300 aa  187  1e-46  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_1729  binding-protein-dependent transport systems inner membrane component  35.82 
 
 
275 aa  187  2e-46  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013525  Tter_0124  binding-protein-dependent transport systems inner membrane component  38.46 
 
 
277 aa  186  5e-46  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009767  Rcas_2544  binding-protein-dependent transport systems inner membrane component  37.63 
 
 
299 aa  186  6e-46  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.238071  normal  0.0688071 
 
 
-
 
NC_009767  Rcas_3565  binding-protein-dependent transport systems inner membrane component  37.2 
 
 
291 aa  186  6e-46  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.276199 
 
 
-
 
NC_012669  Bcav_0791  binding-protein-dependent transport systems inner membrane component  35.62 
 
 
308 aa  183  3e-45  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.013285 
 
 
-
 
NC_013525  Tter_0506  binding-protein-dependent transport systems inner membrane component  34.85 
 
 
294 aa  182  5.0000000000000004e-45  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009616  Tmel_1014  binding-protein-dependent transport systems inner membrane component  36.68 
 
 
273 aa  182  7e-45  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_2820  binding-protein-dependent transport systems inner membrane component  39.06 
 
 
299 aa  181  1e-44  Roseiflexus sp. RS-1  Bacteria  hitchhiker  0.0050805  normal 
 
 
-
 
NC_011988  Avi_5582  ABC transporter membrane spanning protein (galacturonic acid)  36.12 
 
 
293 aa  181  1e-44  Agrobacterium vitis S4  Bacteria  normal  0.542291  n/a   
 
 
-
 
NC_012669  Bcav_0312  binding-protein-dependent transport systems inner membrane component  35.81 
 
 
298 aa  181  2e-44  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2317  binding-protein-dependent transport systems inner membrane component  38.35 
 
 
299 aa  180  2.9999999999999997e-44  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_0717  binding-protein-dependent transport systems inner membrane component  39.63 
 
 
279 aa  179  4e-44  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2040  binding-protein-dependent transport systems inner membrane component  36.43 
 
 
305 aa  179  4.999999999999999e-44  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00998336  n/a   
 
 
-
 
NC_011886  Achl_0497  binding-protein-dependent transport systems inner membrane component  32.24 
 
 
306 aa  177  2e-43  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000825086 
 
 
-
 
NC_013525  Tter_0185  binding-protein-dependent transport systems inner membrane component  35.66 
 
 
301 aa  177  2e-43  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013526  Tter_2512  binding-protein-dependent transport systems inner membrane component  36.86 
 
 
292 aa  176  4e-43  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.660216  n/a   
 
 
-
 
NC_013093  Amir_2918  binding-protein-dependent transport systems inner membrane component  34.94 
 
 
290 aa  174  9.999999999999999e-43  Actinosynnema mirum DSM 43827  Bacteria  normal  0.787566  n/a   
 
 
-
 
NC_012669  Bcav_1657  binding-protein-dependent transport systems inner membrane component  36.36 
 
 
284 aa  173  2.9999999999999996e-42  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.354053  normal  0.174244 
 
 
-
 
NC_013131  Caci_7904  binding-protein-dependent transport systems inner membrane component  36.74 
 
 
271 aa  172  5e-42  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_011368  Rleg2_5351  binding-protein-dependent transport systems inner membrane component  35.57 
 
 
294 aa  172  5e-42  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.466926 
 
 
-
 
NC_013172  Bfae_29030  carbohydrate ABC transporter membrane protein  35.69 
 
 
275 aa  172  6.999999999999999e-42  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_2458  binding-protein-dependent transport systems inner membrane component  34.19 
 
 
281 aa  171  1e-41  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.162326  n/a   
 
 
-
 
NC_013205  Aaci_0794  binding-protein-dependent transport systems inner membrane component  36.36 
 
 
273 aa  171  1e-41  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.256296  n/a   
 
 
-
 
NC_012848  Rleg_5052  binding-protein-dependent transport systems inner membrane component  34.86 
 
 
278 aa  171  2e-41  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.482027  normal 
 
 
-
 
NC_006274  BCZK1636  sugar ABC transporter, permease  35.34 
 
 
277 aa  169  4e-41  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3001  binding-protein-dependent transport systems inner membrane component  35.19 
 
 
308 aa  169  4e-41  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_4081  binding-protein-dependent transport systems inner membrane component  33.46 
 
 
275 aa  168  1e-40  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_010320  Teth514_2199  monosaccharide-transporting ATPase  37.84 
 
 
269 aa  167  2e-40  Thermoanaerobacter sp. X514  Bacteria  normal  0.139368  n/a   
 
 
-
 
NC_003909  BCE_1901  sugar ABC transporter, permease protein  33.94 
 
 
277 aa  167  2.9999999999999998e-40  Bacillus cereus ATCC 10987  Bacteria  normal  0.682079  n/a   
 
 
-
 
NC_011886  Achl_3122  binding-protein-dependent transport systems inner membrane component  30.9 
 
 
305 aa  166  2.9999999999999998e-40  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.290341 
 
 
-
 
NC_008541  Arth_3322  binding-protein-dependent transport systems inner membrane component  31.56 
 
 
309 aa  166  4e-40  Arthrobacter sp. FB24  Bacteria  normal  0.0903437  n/a   
 
 
-
 
NC_009664  Krad_0591  binding-protein-dependent transport systems inner membrane component  38.13 
 
 
300 aa  166  4e-40  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.303793  normal  0.0150565 
 
 
-
 
NC_011886  Achl_3568  binding-protein-dependent transport systems inner membrane component  34.63 
 
 
315 aa  166  5.9999999999999996e-40  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_012669  Bcav_0921  binding-protein-dependent transport systems inner membrane component  37.71 
 
 
284 aa  166  5.9999999999999996e-40  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_012034  Athe_2374  binding-protein-dependent transport systems inner membrane component  32.97 
 
 
285 aa  165  6.9999999999999995e-40  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_011368  Rleg2_5335  binding-protein-dependent transport systems inner membrane component  33.95 
 
 
278 aa  165  9e-40  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.716321  normal 
 
 
-
 
NC_010571  Oter_1750  binding-protein-dependent transport systems inner membrane component  37.91 
 
 
381 aa  164  1.0000000000000001e-39  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0802  binding-protein-dependent transport systems inner membrane component  38.74 
 
 
286 aa  164  2.0000000000000002e-39  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.0123708 
 
 
-
 
NC_011981  Avi_7346  ABC transporter membrane spanning protein (sugar)  33.95 
 
 
278 aa  164  2.0000000000000002e-39  Agrobacterium vitis S4  Bacteria  normal  0.477248  n/a   
 
 
-
 
NC_013526  Tter_2293  binding-protein-dependent transport systems inner membrane component  32.71 
 
 
297 aa  163  3e-39  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_12076  sugar ABC transporter membrane protein  34.07 
 
 
280 aa  162  5.0000000000000005e-39  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_2231  binding-protein-dependent transport systems inner membrane component  34.02 
 
 
297 aa  162  7e-39  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.807172 
 
 
-
 
NC_011661  Dtur_0439  binding-protein-dependent transport systems inner membrane component  32.47 
 
 
279 aa  160  2e-38  Dictyoglomus turgidum DSM 6724  Bacteria  normal  0.0806983  n/a   
 
 
-
 
NC_013172  Bfae_01230  ABC-type sugar transport system, permease component  35.07 
 
 
307 aa  160  2e-38  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_0915  binding-protein-dependent transport systems inner membrane component  35.5 
 
 
280 aa  160  3e-38  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_2079  binding-protein-dependent transport systems inner membrane component  30.88 
 
 
280 aa  160  4e-38  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.697078  n/a   
 
 
-
 
NC_011661  Dtur_0376  binding-protein-dependent transport systems inner membrane component  35.04 
 
 
278 aa  159  4e-38  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_29710  carbohydrate ABC transporter membrane protein  35.06 
 
 
304 aa  159  6e-38  Brachybacterium faecium DSM 4810  Bacteria  normal  0.942295  n/a   
 
 
-
 
NC_009939  Dgeo_3104  ABC transporter, permease component  36.56 
 
 
292 aa  159  7e-38  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_013174  Jden_0511  binding-protein-dependent transport systems inner membrane component  34.19 
 
 
318 aa  158  9e-38  Jonesia denitrificans DSM 20603  Bacteria  hitchhiker  0.000451963  hitchhiker  0.00127985 
 
 
-
 
NC_013530  Xcel_2649  binding-protein-dependent transport systems inner membrane component  32.95 
 
 
300 aa  158  1e-37  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_4196  binding-protein-dependent transport systems inner membrane component  33.56 
 
 
292 aa  157  1e-37  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_2729  binding-protein-dependent transport systems inner membrane component  34.94 
 
 
293 aa  158  1e-37  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010001  Cphy_3400  binding-protein-dependent transport systems inner membrane component  32.47 
 
 
283 aa  157  2e-37  Clostridium phytofermentans ISDg  Bacteria  normal  0.372936  n/a   
 
 
-
 
NC_013526  Tter_2301  binding-protein-dependent transport systems inner membrane component  37.25 
 
 
285 aa  157  2e-37  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.866945  n/a   
 
 
-
 
NC_010001  Cphy_0289  binding-protein-dependent transport systems inner membrane component  33.09 
 
 
276 aa  156  3e-37  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_2035  binding-protein-dependent transport systems inner membrane component  32.78 
 
 
291 aa  156  4e-37  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0974901  normal  0.381629 
 
 
-
 
NC_013131  Caci_4695  binding-protein-dependent transport systems inner membrane component  34.69 
 
 
271 aa  156  4e-37  Catenulispora acidiphila DSM 44928  Bacteria  hitchhiker  0.00258755  normal  0.655339 
 
 
-
 
NC_012669  Bcav_1532  binding-protein-dependent transport systems inner membrane component  36.64 
 
 
305 aa  156  4e-37  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.995394  normal  0.0303683 
 
 
-
 
NC_014213  Mesil_3392  fumarate reductase/succinate dehydrogenase flavoprotein domain protein  36.78 
 
 
278 aa  156  4e-37  Meiothermus silvanus DSM 9946  Bacteria  normal  0.196448  normal  0.954202 
 
 
-
 
NC_013530  Xcel_2536  binding-protein-dependent transport systems inner membrane component  32.78 
 
 
306 aa  156  5.0000000000000005e-37  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.250656  n/a   
 
 
-
 
NC_009939  Dgeo_2917  ABC-type sugar transport system, permease component  35.21 
 
 
273 aa  156  5.0000000000000005e-37  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_007413  Ava_2094  binding-protein dependent transport system inner membrane protein  33.7 
 
 
279 aa  155  6e-37  Anabaena variabilis ATCC 29413  Bacteria  normal  0.179988  hitchhiker  0.00000184258 
 
 
-
 
NC_012669  Bcav_3897  binding-protein-dependent transport systems inner membrane component  37.34 
 
 
289 aa  155  7e-37  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.858464 
 
 
-
 
NC_014213  Mesil_3228  binding-protein-dependent transport systems inner membrane component  34.84 
 
 
272 aa  155  1e-36  Meiothermus silvanus DSM 9946  Bacteria  decreased coverage  0.00685083  normal 
 
 
-
 
NC_008541  Arth_3327  binding-protein-dependent transport systems inner membrane component  33.67 
 
 
314 aa  154  1e-36  Arthrobacter sp. FB24  Bacteria  hitchhiker  0.00328886  n/a   
 
 
-
 
NC_014213  Mesil_3420  proteophosphoglycan ppg4  34.84 
 
 
272 aa  155  1e-36  Meiothermus silvanus DSM 9946  Bacteria  normal  0.257772  normal 
 
 
-
 
NC_007413  Ava_2748  binding-protein dependent transport system inner membrane protein  32.34 
 
 
306 aa  154  2e-36  Anabaena variabilis ATCC 29413  Bacteria  normal  0.925228  normal  0.18236 
 
 
-
 
NC_013521  Sked_05240  carbohydrate ABC transporter membrane protein  32.95 
 
 
312 aa  154  2e-36  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_1703  putative transport system permease ABC transporter protein  32.89 
 
 
292 aa  154  2.9999999999999998e-36  Thermobifida fusca YX  Bacteria  normal  0.757038  n/a   
 
 
-
 
NC_011831  Cagg_1688  binding-protein-dependent transport systems inner membrane component  37.67 
 
 
354 aa  153  2.9999999999999998e-36  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_2832  binding-protein-dependent transport systems inner membrane component  35.03 
 
 
324 aa  153  4e-36  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.051903  normal 
 
 
-
 
NC_014158  Tpau_1638  binding-protein-dependent transport systems inner membrane component  32.55 
 
 
311 aa  153  4e-36  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.155632  n/a   
 
 
-
 
NC_011881  Achl_4623  binding-protein-dependent transport systems inner membrane component  34.12 
 
 
285 aa  153  4e-36  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013595  Sros_5822  putative sugar uptake ABC transporter permease protein  32.89 
 
 
298 aa  153  4e-36  Streptosporangium roseum DSM 43021  Bacteria  normal  0.546263  normal 
 
 
-
 
NC_013517  Sterm_4048  binding-protein-dependent transport systems inner membrane component  28.01 
 
 
287 aa  153  4e-36  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_2543  binding-protein-dependent transport systems inner membrane component  31.49 
 
 
300 aa  152  7e-36  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_20610  binding-protein-dependent transport systems inner membrane component  33.85 
 
 
273 aa  152  8e-36  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_4881  binding-protein-dependent transport systems inner membrane component  33.8 
 
 
295 aa  152  8.999999999999999e-36  Conexibacter woesei DSM 14684  Bacteria  normal  0.48115  normal 
 
 
-
 
NC_011831  Cagg_0727  binding-protein-dependent transport systems inner membrane component  32.34 
 
 
279 aa  151  1e-35  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.000188602  normal 
 
 
-
 
NC_011899  Hore_04290  binding-protein-dependent transport systems inner membrane component  32.23 
 
 
297 aa  151  1e-35  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_1700  binding-protein-dependent transport systems inner membrane component  35.02 
 
 
281 aa  151  1e-35  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_3428  binding-protein-dependent transport systems inner membrane component  36.69 
 
 
280 aa  151  1e-35  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_3129  binding-protein-dependent transport systems inner membrane component  33.22 
 
 
313 aa  150  3e-35  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.0180019 
 
 
-
 
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