Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_3897 |
Symbol | |
ID | 7858710 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 4316182 |
End bp | 4317051 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643868001 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_002883901 |
Protein GI | 229822375 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.858464 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCAG GAGGGCCGCG AGCGACGGCG ATCCCGGCGA CCGGCCTGCG GTCGCGGCGC GTGGTGACCC ACGCCGTCCT GATCCTCGGC GCACTGGTCA TGATCTATCC GTTGCTGTGG ATGCTGTCGG CGTCGTTCAA GGAGCCGGAC CAGATCTTCA CGTCGGACTC GCTGATCCCC CAGGACCCCG TGCTGACGAA CTACCTGCAG GGCTGGGTCG GGCTCGGGCG GCCGTTCTCG ACGTACCTGC TCAACTCGCT CCTGGTCTGC GCGGCGGTCG TCGTCGGTAA CGTGCTCTCG TGCTCGCTCG CCGCCTACGC GTTCGCCCGG ATGAGCTTCG TGGGTCGCAA GGTGCTGTTC GGCGTGATGC TCGCGACGAT GATGCTGCCG CACCACGTCA CGCTGATCGC GCAGTACGCG ATCTTCCGGG ACCTGGGCTG GGTGGACACG TACCTGCCGC TGATCGTGCC GAAGTTCCTC GCGGTCGAGG CGTTCTTCAT CTTCCTCATG GTGCAGTTCA TCCGCGGGCT GCCGCGCGAG CTGGACGACG CCGCCCGGAT CGACGGGTGC GGCCAGCTGC AGATCTACTG GCGTGTGGTG TTCCCGCTGC TCCAGCCGGC GCTCGTGACG ACGGCGATCT TCTCGTTCAT CTGGACCTAC AACGACTTCC TCACGCAGCT CATCTACGTG TCGGACCCGA AGCTGCTCAC GGTGCCGCTC GCGCTGCGCA CGTTCCTGGA CGCGTCCGGG CAGTCGCAGT GGGGCGAGAT GTTCGCGATG AGCATCGTCA CGCTCGTGCC GGTGCTGGTC GTGTTCGTCG TCTTCCAGCG GCGGATCATC GACGGGATCG CGCACTCCGG CATGAAGTAG
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Protein sequence | MSAGGPRATA IPATGLRSRR VVTHAVLILG ALVMIYPLLW MLSASFKEPD QIFTSDSLIP QDPVLTNYLQ GWVGLGRPFS TYLLNSLLVC AAVVVGNVLS CSLAAYAFAR MSFVGRKVLF GVMLATMMLP HHVTLIAQYA IFRDLGWVDT YLPLIVPKFL AVEAFFIFLM VQFIRGLPRE LDDAARIDGC GQLQIYWRVV FPLLQPALVT TAIFSFIWTY NDFLTQLIYV SDPKLLTVPL ALRTFLDASG QSQWGEMFAM SIVTLVPVLV VFVVFQRRII DGIAHSGMK
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