91 homologs were found in PanDaTox collection
for query gene RPC_0598 on replicon NC_007925
Organism: Rhodopseudomonas palustris BisB18



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007925  RPC_0598  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  100 
 
 		 247 aa  494  1e-139  Rhodopseudomonas palustris BisB18  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007964  Nham_0444  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  69.26 
 
 		 247 aa  340  1e-92  Nitrobacter hamburgensis X14  Bacteria  normal  1  n/a   
 
 
-
 
NC_007406  Nwi_0349  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  68.85 
 
 		 245 aa  331  6e-90  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.334445  normal  0.250597 
 
 
-
 
NC_009485  BBta_7366  hypothetical protein  65.84 
 
 		 242 aa  323  2e-87  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.708194  normal  1 
 
 
-
 
NC_011004  Rpal_0362  pyridoxamine 5'-phosphate oxidase-related FMN-binding  66.26 
 
 		 244 aa  320  1.9999999999999998e-86  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.34488  n/a   
 
 
-
 
NC_007778  RPB_0462  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  64.23 
 
 		 244 aa  312  2.9999999999999996e-84  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  0.45404 
 
 
-
 
NC_007958  RPD_0366  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  64.2 
 
 		 244 aa  301  6.000000000000001e-81  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  hitchhiker  0.0042233 
 
 
-
 
NC_011894  Mnod_5432  pyridoxamine 5'-phosphate oxidase-related FMN-binding  43.57 
 
 		 260 aa  196  2.0000000000000003e-49  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.932188  n/a   
 
 
-
 
NC_009720  Xaut_2844  pyridoxamine 5'-phosphate oxidase-related FMN-binding  45.42 
 
 		 238 aa  182  3e-45  Xanthobacter autotrophicus Py2  Bacteria  normal  1  normal  0.907911 
 
 
-
 
NC_010511  M446_0224  pyridoxamine 5'-phosphate oxidase-related FMN-binding  44.44 
 
 		 260 aa  177  1e-43  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  0.011733 
 
 
-
 
NC_011666  Msil_1374  pyridoxamine 5'-phosphate oxidase-related FMN-binding  44.67 
 
 		 256 aa  176  3e-43  Methylocella silvestris BL2  Bacteria  n/a    normal  0.694327 
 
 
-
 
NC_010725  Mpop_1180  pyridoxamine 5'-phosphate oxidase-related FMN-binding  44.98 
 
 		 270 aa  174  9.999999999999999e-43  Methylobacterium populi BJ001  Bacteria  normal  1  normal  0.171584 
 
 
-
 
NC_011757  Mchl_1401  pyridoxamine 5'-phosphate oxidase-related FMN-binding  44.54 
 
 		 271 aa  173  1.9999999999999998e-42  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.509564  normal  0.321093 
 
 
-
 
NC_010505  Mrad2831_3090  pyridoxamine 5'-phosphate oxidase-related FMN-binding  42.74 
 
 		 261 aa  173  1.9999999999999998e-42  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.853398  normal  1 
 
 
-
 
NC_010172  Mext_1239  pyridoxamine 5'-phosphate oxidase-related FMN-binding  44.1 
 
 		 271 aa  172  2.9999999999999996e-42  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010581  Bind_2742  pyridoxamine 5'-phosphate oxidase-related FMN-binding  45 
 
 		 260 aa  169  3e-41  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  1  normal  0.615645 
 
 
-
 
NC_008254  Meso_2207  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  41.18 
 
 		 251 aa  163  3e-39  Chelativorans sp. BNC1  Bacteria  normal  0.359427  n/a   
 
 
-
 
NC_009667  Oant_1581  pyridoxamine 5'-phosphate oxidase-related FMN-binding  38.36 
 
 		 245 aa  149  3e-35  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.0647071  n/a   
 
 
-
 
NC_009636  Smed_2308  pyridoxamine 5'-phosphate oxidase-related FMN-binding  40.85 
 
 		 247 aa  147  1.0000000000000001e-34  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  0.547637 
 
 
-
 
NC_009719  Plav_3592  pyridoxamine 5'-phosphate oxidase-related FMN-binding  37.66 
 
 		 255 aa  132  6e-30  Parvibaculum lavamentivorans DS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007643  Rru_A3420  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  36.29 
 
 		 270 aa  117  1.9999999999999998e-25  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.331043  n/a   
 
 
-
 
NC_011369  Rleg2_2826  pyridoxamine 5'-phosphate oxidase-related FMN-binding  34.08 
 
 		 249 aa  113  3e-24  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.171612  normal  0.204589 
 
 
-
 
NC_012850  Rleg_3095  pyridoxamine 5'-phosphate oxidase-related FMN-binding  33.48 
 
 		 249 aa  109  4.0000000000000004e-23  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  1 
 
 
-
 
NC_002977  MCA0309  hypothetical protein  30.13 
 
 		 238 aa  106  3e-22  Methylococcus capsulatus str. Bath  Bacteria  normal  1  n/a   
 
 
-
 
NC_009338  Mflv_1085  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  32.68 
 
 		 276 aa  105  5e-22  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.429706  normal  0.50341 
 
 
-
 
NC_008726  Mvan_5737  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  33.86 
 
 		 270 aa  105  8e-22  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  0.602445 
 
 
-
 
NC_008463  PA14_57040  hypothetical protein  31.51 
 
 		 244 aa  97.8  1e-19  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012560  Avin_13440  pyridoxamine 5-phosphate oxidase  33.19 
 
 		 245 aa  97.1  2e-19  Azotobacter vinelandii DJ  Bacteria  normal  1  n/a   
 
 
-
 
NC_009952  Dshi_2212  hypothetical protein  41.22 
 
 		 164 aa  96.7  3e-19  Dinoroseobacter shibae DFL 12  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011989  Avi_3284  hypothetical protein  38.51 
 
 		 243 aa  95.1  9e-19  Agrobacterium vitis S4  Bacteria  normal  1  n/a   
 
 
-
 
NC_010501  PputW619_0965  pyridoxamine 5'-phosphate oxidase-related FMN-binding  30.87 
 
 		 243 aa  95.1  1e-18  Pseudomonas putida W619  Bacteria  normal  0.499992  normal  0.821374 
 
 
-
 
NC_009656  PSPA7_4959  hypothetical protein  31.4 
 
 		 244 aa  95.1  1e-18  Pseudomonas aeruginosa PA7  Bacteria  normal  0.112474  n/a   
 
 
-
 
NC_014158  Tpau_0857  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  34.22 
 
 		 267 aa  93.6  2e-18  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.579175  n/a   
 
 
-
 
NC_013739  Cwoe_3456  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  30.74 
 
 		 268 aa  92.4  5e-18  Conexibacter woesei DSM 14684  Bacteria  normal  0.0456393  normal  0.068579 
 
 
-
 
NC_009512  Pput_4366  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  30 
 
 		 243 aa  91.7  9e-18  Pseudomonas putida F1  Bacteria  normal  0.809108  normal  0.082398 
 
 
-
 
NC_010681  Bphyt_0397  pyridoxamine 5'-phosphate oxidase-related FMN-binding  33.33 
 
 		 220 aa  88.6  9e-17  Burkholderia phytofirmans PsJN  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010322  PputGB1_4491  pyridoxamine 5'-phosphate oxidase-related FMN-binding  29.13 
 
 		 276 aa  88.6  9e-17  Pseudomonas putida GB-1  Bacteria  normal  0.0201918  normal  1 
 
 
-
 
NC_002947  PP_1358  hypothetical protein  29.57 
 
 		 289 aa  88.2  1e-16  Pseudomonas putida KT2440  Bacteria  hitchhiker  0.0010611  normal  0.192229 
 
 
-
 
NC_008146  Mmcs_5122  pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein  33.47 
 
 		 266 aa  87  2e-16  Mycobacterium sp. MCS  Bacteria  normal  1  n/a   
 
 
-
 
NC_008705  Mkms_5211  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  33.47 
 
 		 266 aa  87  2e-16  Mycobacterium sp. KMS  Bacteria  normal  0.733021  normal  1 
 
 
-
 
NC_007951  Bxe_A4323  hypothetical protein  35.98 
 
 		 217 aa  87  2e-16  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009439  Pmen_3685  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  29.24 
 
 		 244 aa  87.4  2e-16  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009077  Mjls_5502  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  33.47 
 
 		 266 aa  86.3  5e-16  Mycobacterium sp. JLS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009428  Rsph17025_0512  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  38.78 
 
 		 165 aa  85.9  6e-16  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  1  normal  0.0680495 
 
 
-
 
NC_011138  MADE_01539  uncharacterized metal-binding protein  25.21 
 
 		 243 aa  84  0.000000000000002  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.504021  n/a   
 
 
-
 
NC_010622  Bphy_0115  pyridoxamine 5'-phosphate oxidase-related FMN-binding  31.51 
 
 		 221 aa  84.3  0.000000000000002  Burkholderia phymatum STM815  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007492  Pfl01_4504  pyridoxamine 5'-phosphate oxidase-like, FMN-binding  28.09 
 
 		 243 aa  82.8  0.000000000000004  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  decreased coverage  0.000287779 
 
 
-
 
NC_010508  Bcenmc03_0262  pyridoxamine 5'-phosphate oxidase-related FMN-binding  33.85 
 
 		 219 aa  82.4  0.000000000000005  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  0.854509 
 
 
-
 
NC_011891  A2cp1_0907  pyridoxamine 5'-phosphate oxidase-related FMN-binding  41.04 
 
 		 169 aa  82.4  0.000000000000006  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  unclonable  0.000000000620808  n/a   
 
 
-
 
NC_008060  Bcen_2826  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  33.33 
 
 		 219 aa  80.5  0.00000000000002  Burkholderia cenocepacia AU 1054  Bacteria  normal  1  n/a   
 
 
-
 
NC_008542  Bcen2424_0280  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  33.33 
 
 		 219 aa  80.5  0.00000000000002  Burkholderia cenocepacia HI2424  Bacteria  normal  0.450879  n/a   
 
 
-
 
NC_008044  TM1040_2264  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  38.16 
 
 		 171 aa  78.6  0.0000000000001  Ruegeria sp. TM1040  Bacteria  normal  0.159731  normal  1 
 
 
-
 
NC_008228  Patl_1491  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  25.89 
 
 		 244 aa  78.2  0.0000000000001  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_007510  Bcep18194_A3383  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  32.81 
 
 		 219 aa  77  0.0000000000002  Burkholderia sp. 383  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008390  Bamb_0194  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  32.81 
 
 		 248 aa  76.6  0.0000000000003  Burkholderia ambifaria AMMD  Bacteria  normal  1  n/a   
 
 
-
 
NC_007651  BTH_I3156  pyridoxamine 5'-phosphate oxidase family protein  35.1 
 
 		 240 aa  76.3  0.0000000000005  Burkholderia thailandensis E264  Bacteria  normal  1  n/a   
 
 
-
 
NC_011677  PHATRDRAFT_4413  predicted protein  30.22 
 
 		 259 aa  75.9  0.0000000000006  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  0.748295  n/a   
 
 
-
 
NC_009767  Rcas_3461  pyridoxamine 5'-phosphate oxidase-related FMN-binding  40.14 
 
 		 170 aa  75.5  0.0000000000007  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  hitchhiker  0.00895829 
 
 
-
 
NC_011145  AnaeK_0903  pyridoxamine 5'-phosphate oxidase-related FMN-binding  39.55 
 
 		 167 aa  75.5  0.0000000000008  Anaeromyxobacter sp. K  Bacteria  decreased coverage  0.00546716  n/a   
 
 
-
 
NC_011831  Cagg_1695  pyridoxamine 5'-phosphate oxidase-related FMN-binding  34.87 
 
 		 167 aa  75.1  0.000000000001  Chloroflexus aggregans DSM 9485  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010551  BamMC406_0208  pyridoxamine 5'-phosphate oxidase-related FMN-binding  31.96 
 
 		 219 aa  74.7  0.000000000001  Burkholderia ambifaria MC40-6  Bacteria  normal  1  normal  0.996634 
 
 
-
 
NC_009076  BURPS1106A_3910  pyridoxamine 5'-phosphate oxidase family protein  33.16 
 
 		 226 aa  74.3  0.000000000002  Burkholderia pseudomallei 1106a  Bacteria  normal  1  n/a   
 
 
-
 
NC_008785  BMASAVP1_A3405  pyridoxamine 5'-phosphate oxidase family protein  33.16 
 
 		 226 aa  74.3  0.000000000002  Burkholderia mallei SAVP1  Bacteria  normal  0.0603808  n/a   
 
 
-
 
NC_006348  BMA2903  hypothetical protein  33.16 
 
 		 226 aa  74.3  0.000000000002  Burkholderia mallei ATCC 23344  Bacteria  normal  1  n/a   
 
 
-
 
NC_009074  BURPS668_3829  pyridoxamine 5'-phosphate oxidase family protein  33.16 
 
 		 226 aa  74.3  0.000000000002  Burkholderia pseudomallei 668  Bacteria  normal  0.841691  n/a   
 
 
-
 
NC_009080  BMA10247_2964  pyridoxamine 5'-phosphate oxidase family protein  33.16 
 
 		 226 aa  74.3  0.000000000002  Burkholderia mallei NCTC 10247  Bacteria  normal  0.920476  n/a   
 
 
-
 
NC_008836  BMA10229_A1637  pyridoxamine 5'-phosphate oxidase family protein  33.16 
 
 		 291 aa  73.6  0.000000000003  Burkholderia mallei NCTC 10229  Bacteria  normal  0.600964  n/a   
 
 
-
 
NC_007802  Jann_3613  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  37.67 
 
 		 184 aa  73.6  0.000000000003  Jannaschia sp. CCS1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007434  BURPS1710b_0049  pyridoxamine 5'-phosphate oxidase family protein  33.16 
 
 		 288 aa  73.6  0.000000000003  Burkholderia pseudomallei 1710b  Bacteria  normal  1  n/a   
 
 
-
 
NC_009523  RoseRS_2721  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  39.16 
 
 		 171 aa  72.4  0.000000000006  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008686  Pden_1323  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  36.73 
 
 		 161 aa  72.4  0.000000000006  Paracoccus denitrificans PD1222  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008686  Pden_1574  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  36.73 
 
 		 161 aa  72.4  0.000000000006  Paracoccus denitrificans PD1222  Bacteria  normal  0.588617  normal  0.0203021 
 
 
-
 
NC_010084  Bmul_0188  pyridoxamine 5'-phosphate oxidase-related FMN-binding  32.81 
 
 		 254 aa  72.4  0.000000000007  Burkholderia multivorans ATCC 17616  Bacteria  normal  1  hitchhiker  0.0000540256 
 
 
-
 
NC_007974  Rmet_5353  hypothetical protein  36.15 
 
 		 217 aa  70.9  0.00000000002  Cupriavidus metallidurans CH34  Bacteria  normal  0.513248  normal  1 
 
 
-
 
NC_009049  Rsph17029_2234  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  37.33 
 
 		 164 aa  67  0.0000000002  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  1  normal  0.957515 
 
 
-
 
NC_007493  RSP_0581  hypothetical protein  37.16 
 
 		 164 aa  66.6  0.0000000003  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007760  Adeh_0858  FMN-binding pyridoxamine 5'-phosphate oxidase-related protein protein  38.17 
 
 		 171 aa  65.1  0.0000000009  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  hitchhiker  0.00651728  n/a   
 
 
-
 
NC_007908  Rfer_1441  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  35.82 
 
 		 162 aa  64.7  0.000000001  Rhodoferax ferrireducens T118  Bacteria  decreased coverage  0.00418233  n/a   
 
 
-
 
NC_008781  Pnap_2042  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  37.24 
 
 		 199 aa  63.9  0.000000002  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.0340627  normal  1 
 
 
-
 
NC_011687  PHATRDRAFT_54952  predicted protein  25.91 
 
 		 415 aa  62.8  0.000000005  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  0.417126  n/a   
 
 
-
 
NC_007404  Tbd_0688  hypothetical protein  31.79 
 
 		 194 aa  62.4  0.000000007  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  1  normal  0.365581 
 
 
-
 
NC_010524  Lcho_1064  pyridoxamine 5'-phosphate oxidase-related FMN-binding  36.51 
 
 		 171 aa  62  0.000000008  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_010002  Daci_4546  pyridoxamine 5'-phosphate oxidase-related FMN-binding  35.63 
 
 		 194 aa  60.5  0.00000002  Delftia acidovorans SPH-1  Bacteria  normal  0.158817  normal  0.600286 
 
 
-
 
NC_009371  OSTLU_41998  predicted protein  25 
 
 		 314 aa  55.1  0.0000009  Ostreococcus lucimarinus CCE9901  Eukaryota  normal  1  normal  1 
 
 
-
 
NC_009365  OSTLU_13022  predicted protein  30.37 
 
 		 276 aa  54.3  0.000002  Ostreococcus lucimarinus CCE9901  Eukaryota  normal  0.197262  normal  0.0448827 
 
 
-
 
NC_011992  Dtpsy_1547  pyridoxamine 5'-phosphate oxidase-related FMN-binding  36 
 
 		 166 aa  53.9  0.000002  Acidovorax ebreus TPSY  Bacteria  normal  0.610229  n/a   
 
 
-
 
NC_008782  Ajs_2312  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  36 
 
 		 166 aa  53.9  0.000002  Acidovorax sp. JS42  Bacteria  normal  1  normal  0.885603 
 
 
-
 
NC_009675  Anae109_0916  pyridoxamine 5'-phosphate oxidase-related FMN-binding  32.52 
 
 		 172 aa  49.7  0.00005  Anaeromyxobacter sp. Fw109-5  Bacteria  hitchhiker  0.00374077  normal  1 
 
 
-
 
NC_009943  Dole_2144  pyridoxamine 5'-phosphate oxidase-related FMN-binding  29.31 
 
 		 147 aa  43.1  0.004  Desulfococcus oleovorans Hxd3  Bacteria  normal  1  n/a   
 
 
-
 
NC_007520  Tcr_0178  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  29.77 
 
 		 173 aa  42.7  0.005  Thiomicrospira crunogena XCL-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_009901  Spea_3325  pyridoxamine 5'-phosphate oxidase-related FMN-binding  30.52 
 
 		 189 aa  42.4  0.006  Shewanella pealeana ATCC 700345  Bacteria  normal  0.0502569  n/a   
 
 
-
 
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