80 homologs were found in PanDaTox collection
for query gene Rsph17029_2234 on replicon NC_009049
Organism: Rhodobacter sphaeroides ATCC 17029



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009049  Rsph17029_2234  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  100 
 
 		 164 aa  317  3e-86  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  1  normal  0.957515 
 
 
-
 
NC_007493  RSP_0581  hypothetical protein  98.17 
 
 		 164 aa  311  2.9999999999999996e-84  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009428  Rsph17025_0512  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  71.78 
 
 		 165 aa  235  2e-61  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  1  normal  0.0680495 
 
 
-
 
NC_009952  Dshi_2212  hypothetical protein  52.8 
 
 		 164 aa  162  1.0000000000000001e-39  Dinoroseobacter shibae DFL 12  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009636  Smed_2308  pyridoxamine 5'-phosphate oxidase-related FMN-binding  53.09 
 
 		 247 aa  158  4e-38  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  0.547637 
 
 
-
 
NC_012850  Rleg_3095  pyridoxamine 5'-phosphate oxidase-related FMN-binding  52.6 
 
 		 249 aa  153  9e-37  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008044  TM1040_2264  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  51.57 
 
 		 171 aa  152  1e-36  Ruegeria sp. TM1040  Bacteria  normal  0.159731  normal  1 
 
 
-
 
NC_011369  Rleg2_2826  pyridoxamine 5'-phosphate oxidase-related FMN-binding  53.25 
 
 		 249 aa  150  8e-36  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.171612  normal  0.204589 
 
 
-
 
NC_008254  Meso_2207  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  50.94 
 
 		 251 aa  149  2e-35  Chelativorans sp. BNC1  Bacteria  normal  0.359427  n/a   
 
 
-
 
NC_011989  Avi_3284  hypothetical protein  48.7 
 
 		 243 aa  140  9.999999999999999e-33  Agrobacterium vitis S4  Bacteria  normal  1  n/a   
 
 
-
 
NC_007802  Jann_3613  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  50.64 
 
 		 184 aa  136  1e-31  Jannaschia sp. CCS1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009719  Plav_3592  pyridoxamine 5'-phosphate oxidase-related FMN-binding  43.48 
 
 		 255 aa  134  7.000000000000001e-31  Parvibaculum lavamentivorans DS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009667  Oant_1581  pyridoxamine 5'-phosphate oxidase-related FMN-binding  45.27 
 
 		 245 aa  123  9e-28  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.0647071  n/a   
 
 
-
 
NC_008686  Pden_1574  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  46.15 
 
 		 161 aa  116  9.999999999999999e-26  Paracoccus denitrificans PD1222  Bacteria  normal  0.588617  normal  0.0203021 
 
 
-
 
NC_008686  Pden_1323  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  46.15 
 
 		 161 aa  116  9.999999999999999e-26  Paracoccus denitrificans PD1222  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011894  Mnod_5432  pyridoxamine 5'-phosphate oxidase-related FMN-binding  47.97 
 
 		 260 aa  115  1.9999999999999998e-25  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.932188  n/a   
 
 
-
 
NC_010172  Mext_1239  pyridoxamine 5'-phosphate oxidase-related FMN-binding  46.62 
 
 		 271 aa  114  3.9999999999999997e-25  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011757  Mchl_1401  pyridoxamine 5'-phosphate oxidase-related FMN-binding  46.62 
 
 		 271 aa  114  7.999999999999999e-25  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.509564  normal  0.321093 
 
 
-
 
NC_010725  Mpop_1180  pyridoxamine 5'-phosphate oxidase-related FMN-binding  46.62 
 
 		 270 aa  112  3e-24  Methylobacterium populi BJ001  Bacteria  normal  1  normal  0.171584 
 
 
-
 
NC_010511  M446_0224  pyridoxamine 5'-phosphate oxidase-related FMN-binding  45.95 
 
 		 260 aa  112  3e-24  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  0.011733 
 
 
-
 
NC_010505  Mrad2831_3090  pyridoxamine 5'-phosphate oxidase-related FMN-binding  45.27 
 
 		 261 aa  106  1e-22  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.853398  normal  1 
 
 
-
 
NC_010581  Bind_2742  pyridoxamine 5'-phosphate oxidase-related FMN-binding  40.27 
 
 		 260 aa  99.8  2e-20  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  1  normal  0.615645 
 
 
-
 
NC_011666  Msil_1374  pyridoxamine 5'-phosphate oxidase-related FMN-binding  45.04 
 
 		 256 aa  86.3  2e-16  Methylocella silvestris BL2  Bacteria  n/a    normal  0.694327 
 
 
-
 
NC_007958  RPD_0366  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  39.47 
 
 		 244 aa  85.1  3e-16  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  hitchhiker  0.0042233 
 
 
-
 
NC_009485  BBta_7366  hypothetical protein  36.88 
 
 		 242 aa  83.2  0.000000000000001  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.708194  normal  1 
 
 
-
 
NC_007964  Nham_0444  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  36.36 
 
 		 247 aa  82.8  0.000000000000002  Nitrobacter hamburgensis X14  Bacteria  normal  1  n/a   
 
 
-
 
NC_007925  RPC_0598  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  37.33 
 
 		 247 aa  82.8  0.000000000000002  Rhodopseudomonas palustris BisB18  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007406  Nwi_0349  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  36.84 
 
 		 245 aa  80.1  0.00000000000001  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.334445  normal  0.250597 
 
 
-
 
NC_007778  RPB_0462  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  39.86 
 
 		 244 aa  79  0.00000000000002  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  0.45404 
 
 
-
 
NC_010524  Lcho_1064  pyridoxamine 5'-phosphate oxidase-related FMN-binding  40 
 
 		 171 aa  79  0.00000000000003  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_011004  Rpal_0362  pyridoxamine 5'-phosphate oxidase-related FMN-binding  38.51 
 
 		 244 aa  76.3  0.0000000000002  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.34488  n/a   
 
 
-
 
NC_009767  Rcas_3461  pyridoxamine 5'-phosphate oxidase-related FMN-binding  36.43 
 
 		 170 aa  74.7  0.0000000000005  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  hitchhiker  0.00895829 
 
 
-
 
NC_009720  Xaut_2844  pyridoxamine 5'-phosphate oxidase-related FMN-binding  39.86 
 
 		 238 aa  68.9  0.00000000003  Xanthobacter autotrophicus Py2  Bacteria  normal  1  normal  0.907911 
 
 
-
 
NC_007643  Rru_A3420  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  35.14 
 
 		 270 aa  65.9  0.0000000003  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.331043  n/a   
 
 
-
 
NC_009523  RoseRS_2721  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  34.11 
 
 		 171 aa  64.7  0.0000000005  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_002977  MCA0309  hypothetical protein  30.52 
 
 		 238 aa  58.2  0.00000005  Methylococcus capsulatus str. Bath  Bacteria  normal  1  n/a   
 
 
-
 
NC_008781  Pnap_2042  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  31.03 
 
 		 199 aa  56.6  0.0000001  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.0340627  normal  1 
 
 
-
 
NC_009439  Pmen_3685  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  34.33 
 
 		 244 aa  55.1  0.0000005  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008463  PA14_57040  hypothetical protein  34.53 
 
 		 244 aa  54.7  0.0000006  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011831  Cagg_1695  pyridoxamine 5'-phosphate oxidase-related FMN-binding  32.45 
 
 		 167 aa  53.9  0.0000009  Chloroflexus aggregans DSM 9485  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010501  PputW619_0965  pyridoxamine 5'-phosphate oxidase-related FMN-binding  32.84 
 
 		 243 aa  52.4  0.000002  Pseudomonas putida W619  Bacteria  normal  0.499992  normal  0.821374 
 
 
-
 
NC_007520  Tcr_0178  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  27.61 
 
 		 173 aa  52  0.000004  Thiomicrospira crunogena XCL-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_009512  Pput_4366  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  33.58 
 
 		 243 aa  51.6  0.000005  Pseudomonas putida F1  Bacteria  normal  0.809108  normal  0.082398 
 
 
-
 
NC_011891  A2cp1_0907  pyridoxamine 5'-phosphate oxidase-related FMN-binding  35.37 
 
 		 169 aa  51.2  0.000005  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  unclonable  0.000000000620808  n/a   
 
 
-
 
NC_009656  PSPA7_4959  hypothetical protein  33.81 
 
 		 244 aa  51.2  0.000006  Pseudomonas aeruginosa PA7  Bacteria  normal  0.112474  n/a   
 
 
-
 
NC_008726  Mvan_5737  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  33.55 
 
 		 270 aa  51.2  0.000006  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  0.602445 
 
 
-
 
NC_012560  Avin_13440  pyridoxamine 5-phosphate oxidase  33.58 
 
 		 245 aa  50.1  0.00001  Azotobacter vinelandii DJ  Bacteria  normal  1  n/a   
 
 
-
 
NC_008146  Mmcs_5122  pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein  34.48 
 
 		 266 aa  50.4  0.00001  Mycobacterium sp. MCS  Bacteria  normal  1  n/a   
 
 
-
 
NC_008705  Mkms_5211  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  34.48 
 
 		 266 aa  50.4  0.00001  Mycobacterium sp. KMS  Bacteria  normal  0.733021  normal  1 
 
 
-
 
NC_011677  PHATRDRAFT_4413  predicted protein  26.47 
 
 		 259 aa  50.4  0.00001  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  0.748295  n/a   
 
 
-
 
NC_008228  Patl_1491  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  24.31 
 
 		 244 aa  49.3  0.00002  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_009077  Mjls_5502  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  34.48 
 
 		 266 aa  49.3  0.00002  Mycobacterium sp. JLS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011145  AnaeK_0903  pyridoxamine 5'-phosphate oxidase-related FMN-binding  36.57 
 
 		 167 aa  49.7  0.00002  Anaeromyxobacter sp. K  Bacteria  decreased coverage  0.00546716  n/a   
 
 
-
 
NC_010002  Daci_4546  pyridoxamine 5'-phosphate oxidase-related FMN-binding  33.97 
 
 		 194 aa  49.7  0.00002  Delftia acidovorans SPH-1  Bacteria  normal  0.158817  normal  0.600286 
 
 
-
 
NC_010322  PputGB1_4491  pyridoxamine 5'-phosphate oxidase-related FMN-binding  32.09 
 
 		 276 aa  48.9  0.00003  Pseudomonas putida GB-1  Bacteria  normal  0.0201918  normal  1 
 
 
-
 
NC_007492  Pfl01_4504  pyridoxamine 5'-phosphate oxidase-like, FMN-binding  32.37 
 
 		 243 aa  48.5  0.00004  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  decreased coverage  0.000287779 
 
 
-
 
NC_002947  PP_1358  hypothetical protein  33.58 
 
 		 289 aa  48.1  0.00005  Pseudomonas putida KT2440  Bacteria  hitchhiker  0.0010611  normal  0.192229 
 
 
-
 
NC_013739  Cwoe_3456  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  30.08 
 
 		 268 aa  47.8  0.00007  Conexibacter woesei DSM 14684  Bacteria  normal  0.0456393  normal  0.068579 
 
 
-
 
NC_007651  BTH_I3156  pyridoxamine 5'-phosphate oxidase family protein  34.15 
 
 		 240 aa  47.8  0.00007  Burkholderia thailandensis E264  Bacteria  normal  1  n/a   
 
 
-
 
NC_007404  Tbd_0688  hypothetical protein  27.2 
 
 		 194 aa  47.4  0.00008  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  1  normal  0.365581 
 
 
-
 
NC_004310  BR1587  hypothetical protein  32.5 
 
 		 101 aa  47.4  0.00009  Brucella suis 1330  Bacteria  decreased coverage  0.0000195235  n/a   
 
 
-
 
NC_009338  Mflv_1085  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  32.21 
 
 		 276 aa  47.4  0.0001  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.429706  normal  0.50341 
 
 
-
 
NC_014158  Tpau_0857  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  35.29 
 
 		 267 aa  46.2  0.0002  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.579175  n/a   
 
 
-
 
NC_011992  Dtpsy_1547  pyridoxamine 5'-phosphate oxidase-related FMN-binding  29.84 
 
 		 166 aa  45.8  0.0003  Acidovorax ebreus TPSY  Bacteria  normal  0.610229  n/a   
 
 
-
 
NC_008782  Ajs_2312  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  29.84 
 
 		 166 aa  45.8  0.0003  Acidovorax sp. JS42  Bacteria  normal  1  normal  0.885603 
 
 
-
 
NC_007908  Rfer_1441  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  27.59 
 
 		 162 aa  44.7  0.0005  Rhodoferax ferrireducens T118  Bacteria  decreased coverage  0.00418233  n/a   
 
 
-
 
NC_009675  Anae109_0916  pyridoxamine 5'-phosphate oxidase-related FMN-binding  34.68 
 
 		 172 aa  44.7  0.0006  Anaeromyxobacter sp. Fw109-5  Bacteria  hitchhiker  0.00374077  normal  1 
 
 
-
 
NC_010551  BamMC406_0208  pyridoxamine 5'-phosphate oxidase-related FMN-binding  35.46 
 
 		 219 aa  42.7  0.002  Burkholderia ambifaria MC40-6  Bacteria  normal  1  normal  0.996634 
 
 
-
 
NC_007434  BURPS1710b_0049  pyridoxamine 5'-phosphate oxidase family protein  30.83 
 
 		 288 aa  42.4  0.003  Burkholderia pseudomallei 1710b  Bacteria  normal  1  n/a   
 
 
-
 
NC_006348  BMA2903  hypothetical protein  30.83 
 
 		 226 aa  42.4  0.003  Burkholderia mallei ATCC 23344  Bacteria  normal  1  n/a   
 
 
-
 
NC_008785  BMASAVP1_A3405  pyridoxamine 5'-phosphate oxidase family protein  30.83 
 
 		 226 aa  42.4  0.003  Burkholderia mallei SAVP1  Bacteria  normal  0.0603808  n/a   
 
 
-
 
NC_011138  MADE_01539  uncharacterized metal-binding protein  23.19 
 
 		 243 aa  42  0.003  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.504021  n/a   
 
 
-
 
NC_008836  BMA10229_A1637  pyridoxamine 5'-phosphate oxidase family protein  30.83 
 
 		 291 aa  42  0.003  Burkholderia mallei NCTC 10229  Bacteria  normal  0.600964  n/a   
 
 
-
 
NC_009074  BURPS668_3829  pyridoxamine 5'-phosphate oxidase family protein  30.83 
 
 		 226 aa  42.4  0.003  Burkholderia pseudomallei 668  Bacteria  normal  0.841691  n/a   
 
 
-
 
NC_009080  BMA10247_2964  pyridoxamine 5'-phosphate oxidase family protein  30.83 
 
 		 226 aa  42.4  0.003  Burkholderia mallei NCTC 10247  Bacteria  normal  0.920476  n/a   
 
 
-
 
NC_009076  BURPS1106A_3910  pyridoxamine 5'-phosphate oxidase family protein  30.83 
 
 		 226 aa  42.4  0.003  Burkholderia pseudomallei 1106a  Bacteria  normal  1  n/a   
 
 
-
 
NC_008542  Bcen2424_0280  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  32.37 
 
 		 219 aa  41.6  0.005  Burkholderia cenocepacia HI2424  Bacteria  normal  0.450879  n/a   
 
 
-
 
NC_008060  Bcen_2826  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  32.37 
 
 		 219 aa  41.6  0.005  Burkholderia cenocepacia AU 1054  Bacteria  normal  1  n/a   
 
 
-
 
NC_010508  Bcenmc03_0262  pyridoxamine 5'-phosphate oxidase-related FMN-binding  32.37 
 
 		 219 aa  40.8  0.008  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  0.854509 
 
 
-
 
NC_008390  Bamb_0194  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  34.29 
 
 		 248 aa  40.4  0.01  Burkholderia ambifaria AMMD  Bacteria  normal  1  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>