72 homologs were found in PanDaTox collection
for query gene Tcr_0178 on replicon NC_007520
Organism: Thiomicrospira crunogena XCL-2



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007520  Tcr_0178  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  100 
 
 		 173 aa  356  9.999999999999999e-98  Thiomicrospira crunogena XCL-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_011312  VSAL_I1748  heme uptake and utilization protein HuvZ  37.96 
 
 		 176 aa  126  2.0000000000000002e-28  Aliivibrio salmonicida LFI1238  Bacteria  normal  1  n/a   
 
 
-
 
NC_007413  Ava_2287  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  39.04 
 
 		 165 aa  120  6e-27  Anabaena variabilis ATCC 29413  Bacteria  normal  0.448208  normal  1 
 
 
-
 
NC_013457  VEA_001358  pyridoxamine 5'-phosphate oxidase-related putative heme iron utilization protein  33.76 
 
 		 176 aa  120  9e-27  Vibrio sp. Ex25  Bacteria  normal  0.343115  n/a   
 
 
-
 
NC_008309  HS_0722  heme binding protein  36.17 
 
 		 173 aa  119  9.999999999999999e-27  Haemophilus somnus 129PT  Bacteria  normal  1  n/a   
 
 
-
 
NC_009901  Spea_3325  pyridoxamine 5'-phosphate oxidase-related FMN-binding  37.74 
 
 		 189 aa  119  1.9999999999999998e-26  Shewanella pealeana ATCC 700345  Bacteria  normal  0.0502569  n/a   
 
 
-
 
NC_007954  Sden_0792  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  37.04 
 
 		 176 aa  119  1.9999999999999998e-26  Shewanella denitrificans OS217  Bacteria  normal  0.0127904  n/a   
 
 
-
 
NC_010506  Swoo_4002  pyridoxamine 5'-phosphate oxidase-related FMN-binding  37.11 
 
 		 197 aa  118  4.9999999999999996e-26  Shewanella woodyi ATCC 51908  Bacteria  normal  1  normal  0.285219 
 
 
-
 
NC_011663  Sbal223_3336  pyridoxamine 5'-phosphate oxidase-related FMN-binding  38.78 
 
 		 185 aa  114  5e-25  Shewanella baltica OS223  Bacteria  normal  0.195481  normal  1 
 
 
-
 
NC_009784  VIBHAR_05247  hypothetical protein  31.85 
 
 		 176 aa  114  5e-25  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_004347  SO_3667  hypothetical protein  38.85 
 
 		 185 aa  114  6.9999999999999995e-25  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009665  Shew185_1023  pyridoxamine 5'-phosphate oxidase-related FMN-binding  38.78 
 
 		 185 aa  114  7.999999999999999e-25  Shewanella baltica OS185  Bacteria  normal  0.208688  n/a   
 
 
-
 
NC_009997  Sbal195_1056  pyridoxamine 5'-phosphate oxidase-related FMN-binding  38.78 
 
 		 185 aa  114  8.999999999999998e-25  Shewanella baltica OS195  Bacteria  normal  0.957646  normal  1 
 
 
-
 
NC_009438  Sputcn32_0968  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  37.04 
 
 		 185 aa  113  1.0000000000000001e-24  Shewanella putrefaciens CN-32  Bacteria  normal  1  n/a   
 
 
-
 
NC_009456  VC0395_0330  heme-binding protein HutZ  33.76 
 
 		 176 aa  113  1.0000000000000001e-24  Vibrio cholerae O395  Bacteria  normal  0.0843987  n/a   
 
 
-
 
NC_009052  Sbal_0954  pyridoxamine 5'-phosphate oxidase-related FMN-binding  38.78 
 
 		 185 aa  112  3e-24  Shewanella baltica OS155  Bacteria  normal  0.0302738  n/a   
 
 
-
 
NC_008577  Shewana3_3233  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  37.41 
 
 		 185 aa  112  3e-24  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.0067733  normal  0.916764 
 
 
-
 
NC_011761  AFE_0786  heme-utilization protein HutZ, putative  37.24 
 
 		 173 aa  103  1e-21  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  1  n/a   
 
 
-
 
NC_011206  Lferr_0929  pyridoxamine 5'-phosphate oxidase-related FMN-binding  38.03 
 
 		 174 aa  103  2e-21  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013517  Sterm_0587  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  34.48 
 
 		 252 aa  99  3e-20  Sebaldella termitidis ATCC 33386  Bacteria  normal  1  n/a   
 
 
-
 
NC_013422  Hneap_0671  pyridoxamine 5'-phosphate oxidase-related FMN-binding protein  30.3 
 
 		 167 aa  92.8  2e-18  Halothiobacillus neapolitanus c2  Bacteria  normal  1  n/a   
 
 
-
 
NC_012039  Cla_0339  conserved hypothetical protein, pyridoxamine 5'-phosphate oxidase family  32.17 
 
 		 168 aa  85.9  3e-16  Campylobacter lari RM2100  Bacteria  normal  0.988244  n/a   
 
 
-
 
NC_008787  CJJ81176_1600  hypothetical protein  33.33 
 
 		 251 aa  83.2  0.000000000000002  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  1  n/a   
 
 
-
 
NC_009707  JJD26997_1967  hypothetical protein  33.33 
 
 		 247 aa  83.2  0.000000000000002  Campylobacter jejuni subsp. doylei 269.97  Bacteria  normal  1  n/a   
 
 
-
 
NC_003912  CJE1785  hypothetical protein  33.57 
 
 		 251 aa  83.2  0.000000000000002  Campylobacter jejuni RM1221  Bacteria  normal  1  n/a   
 
 
-
 
NC_008599  CFF8240_1758  pyridoxamine 5'-phosphate oxidase family protein  33.79 
 
 		 248 aa  81.6  0.000000000000005  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  1  n/a   
 
 
-
 
NC_009715  CCV52592_0652  pyridoxamine 5'-phosphate oxidase family protein  29.17 
 
 		 283 aa  73.2  0.000000000002  Campylobacter curvus 525.92  Bacteria  hitchhiker  0.00637649  n/a   
 
 
-
 
NC_007908  Rfer_1441  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  26.49 
 
 		 162 aa  72.4  0.000000000003  Rhodoferax ferrireducens T118  Bacteria  decreased coverage  0.00418233  n/a   
 
 
-
 
NC_008781  Pnap_2042  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  26.35 
 
 		 199 aa  71.6  0.000000000004  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.0340627  normal  1 
 
 
-
 
NC_008782  Ajs_2312  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  32.06 
 
 		 166 aa  65.5  0.0000000003  Acidovorax sp. JS42  Bacteria  normal  1  normal  0.885603 
 
 
-
 
NC_011992  Dtpsy_1547  pyridoxamine 5'-phosphate oxidase-related FMN-binding  32.06 
 
 		 166 aa  65.5  0.0000000003  Acidovorax ebreus TPSY  Bacteria  normal  0.610229  n/a   
 
 
-
 
NC_007404  Tbd_0688  hypothetical protein  30.61 
 
 		 194 aa  60.8  0.000000008  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  1  normal  0.365581 
 
 
-
 
NC_011831  Cagg_1695  pyridoxamine 5'-phosphate oxidase-related FMN-binding  26.14 
 
 		 167 aa  58.5  0.00000004  Chloroflexus aggregans DSM 9485  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010524  Lcho_1064  pyridoxamine 5'-phosphate oxidase-related FMN-binding  25.9 
 
 		 171 aa  57.8  0.00000007  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_009512  Pput_4366  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  30.56 
 
 		 243 aa  55.5  0.0000004  Pseudomonas putida F1  Bacteria  normal  0.809108  normal  0.082398 
 
 
-
 
NC_010501  PputW619_0965  pyridoxamine 5'-phosphate oxidase-related FMN-binding  29.86 
 
 		 243 aa  54.7  0.0000007  Pseudomonas putida W619  Bacteria  normal  0.499992  normal  0.821374 
 
 
-
 
NC_007493  RSP_0581  hypothetical protein  28.36 
 
 		 164 aa  53.1  0.000002  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010322  PputGB1_4491  pyridoxamine 5'-phosphate oxidase-related FMN-binding  30.56 
 
 		 276 aa  52  0.000004  Pseudomonas putida GB-1  Bacteria  normal  0.0201918  normal  1 
 
 
-
 
NC_009049  Rsph17029_2234  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  27.61 
 
 		 164 aa  51.6  0.000005  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  1  normal  0.957515 
 
 
-
 
NC_002947  PP_1358  hypothetical protein  30.56 
 
 		 289 aa  51.2  0.000006  Pseudomonas putida KT2440  Bacteria  hitchhiker  0.0010611  normal  0.192229 
 
 
-
 
NC_008254  Meso_2207  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  30.97 
 
 		 251 aa  51.2  0.000007  Chelativorans sp. BNC1  Bacteria  normal  0.359427  n/a   
 
 
-
 
NC_010002  Daci_4546  pyridoxamine 5'-phosphate oxidase-related FMN-binding  25.64 
 
 		 194 aa  48.5  0.00005  Delftia acidovorans SPH-1  Bacteria  normal  0.158817  normal  0.600286 
 
 
-
 
NC_009636  Smed_2308  pyridoxamine 5'-phosphate oxidase-related FMN-binding  30.63 
 
 		 247 aa  47  0.0001  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  0.547637 
 
 
-
 
NC_012850  Rleg_3095  pyridoxamine 5'-phosphate oxidase-related FMN-binding  29.73 
 
 		 249 aa  46.6  0.0002  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011989  Avi_3284  hypothetical protein  25.78 
 
 		 243 aa  46.2  0.0002  Agrobacterium vitis S4  Bacteria  normal  1  n/a   
 
 
-
 
NC_008726  Mvan_5737  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  34.52 
 
 		 270 aa  46.2  0.0002  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  0.602445 
 
 
-
 
NC_011145  AnaeK_0903  pyridoxamine 5'-phosphate oxidase-related FMN-binding  27.03 
 
 		 167 aa  45.8  0.0003  Anaeromyxobacter sp. K  Bacteria  decreased coverage  0.00546716  n/a   
 
 
-
 
NC_009338  Mflv_1085  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  28 
 
 		 276 aa  45.4  0.0003  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.429706  normal  0.50341 
 
 
-
 
NC_007925  RPC_0598  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  29.45 
 
 		 247 aa  45.4  0.0004  Rhodopseudomonas palustris BisB18  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010505  Mrad2831_3090  pyridoxamine 5'-phosphate oxidase-related FMN-binding  27.52 
 
 		 261 aa  45.4  0.0004  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.853398  normal  1 
 
 
-
 
NC_007964  Nham_0444  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  25.53 
 
 		 247 aa  44.7  0.0006  Nitrobacter hamburgensis X14  Bacteria  normal  1  n/a   
 
 
-
 
NC_014158  Tpau_0857  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  35.06 
 
 		 267 aa  44.7  0.0007  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.579175  n/a   
 
 
-
 
NC_008463  PA14_57040  hypothetical protein  31.11 
 
 		 244 aa  44.7  0.0007  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007974  Rmet_5353  hypothetical protein  30.7 
 
 		 217 aa  44.3  0.0008  Cupriavidus metallidurans CH34  Bacteria  normal  0.513248  normal  1 
 
 
-
 
NC_007406  Nwi_0349  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  27.46 
 
 		 245 aa  43.9  0.001  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.334445  normal  0.250597 
 
 
-
 
NC_007492  Pfl01_4504  pyridoxamine 5'-phosphate oxidase-like, FMN-binding  27.08 
 
 		 243 aa  43.9  0.001  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  decreased coverage  0.000287779 
 
 
-
 
NC_008228  Patl_1491  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  26.06 
 
 		 244 aa  43.9  0.001  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_002977  MCA0309  hypothetical protein  22.88 
 
 		 238 aa  43.1  0.002  Methylococcus capsulatus str. Bath  Bacteria  normal  1  n/a   
 
 
-
 
NC_009428  Rsph17025_0512  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  24.65 
 
 		 165 aa  43.1  0.002  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  1  normal  0.0680495 
 
 
-
 
NC_010508  Bcenmc03_0262  pyridoxamine 5'-phosphate oxidase-related FMN-binding  26.12 
 
 		 219 aa  42.4  0.003  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  0.854509 
 
 
-
 
NC_009439  Pmen_3685  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  29.01 
 
 		 244 aa  42.7  0.003  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011891  A2cp1_0907  pyridoxamine 5'-phosphate oxidase-related FMN-binding  26.71 
 
 		 169 aa  42.4  0.003  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  unclonable  0.000000000620808  n/a   
 
 
-
 
NC_012560  Avin_13440  pyridoxamine 5-phosphate oxidase  28.78 
 
 		 245 aa  42.7  0.003  Azotobacter vinelandii DJ  Bacteria  normal  1  n/a   
 
 
-
 
NC_010084  Bmul_0188  pyridoxamine 5'-phosphate oxidase-related FMN-binding  26.87 
 
 		 254 aa  42  0.004  Burkholderia multivorans ATCC 17616  Bacteria  normal  1  hitchhiker  0.0000540256 
 
 
-
 
NC_008060  Bcen_2826  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  26.87 
 
 		 219 aa  42  0.005  Burkholderia cenocepacia AU 1054  Bacteria  normal  1  n/a   
 
 
-
 
NC_008542  Bcen2424_0280  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  26.87 
 
 		 219 aa  42  0.005  Burkholderia cenocepacia HI2424  Bacteria  normal  0.450879  n/a   
 
 
-
 
NC_007760  Adeh_0858  FMN-binding pyridoxamine 5'-phosphate oxidase-related protein protein  27.42 
 
 		 171 aa  42  0.005  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  hitchhiker  0.00651728  n/a   
 
 
-
 
NC_009036  Sbal_4453  hypothetical protein  41.86 
 
 		 107 aa  42  0.005  Shewanella baltica OS155  Bacteria  normal  1  normal  0.986317 
 
 
-
 
NC_008390  Bamb_0194  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  25 
 
 		 248 aa  41.6  0.006  Burkholderia ambifaria AMMD  Bacteria  normal  1  n/a   
 
 
-
 
NC_013739  Cwoe_3456  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  32.47 
 
 		 268 aa  41.6  0.006  Conexibacter woesei DSM 14684  Bacteria  normal  0.0456393  normal  0.068579 
 
 
-
 
NC_011369  Rleg2_2826  pyridoxamine 5'-phosphate oxidase-related FMN-binding  27.03 
 
 		 249 aa  41.2  0.007  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.171612  normal  0.204589 
 
 
-
 
NC_009523  RoseRS_2721  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  23.53 
 
 		 171 aa  40.8  0.009  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
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