Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_2264 |
Symbol | |
ID | 4077331 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 2380533 |
End bp | 2381048 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638007586 |
Product | pyridoxamine 5'-phosphate oxidase-related, FMN-binding |
Protein accession | YP_614258 |
Protein GI | 99082104 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0748] Putative heme iron utilization protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.159731 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCACAAG ATACCCCACC CTCCGAAAAA CCGACCTCTC CAATCCGCCC CACCGATGAT GAGGCGCGCA CGCTGGCCCA GAGCCTGATC GCAGAGGCAG ATTTTGCCGC GCTCGCAACG CTCAGTGATG AGGGCCACCC GGTCCAGAGC CGCGTCGCCT TTGCGCTCGA TGCGTCGGGT GGGCCGATTT CGCTCGTCTC GACACTGGCG CAGCACGCTC AGGCGATGGC GGTCCGCCCG CAGGTCTCTC TCCTTGTGGG AGAGCCGGGC GAGAAGGGCG ATCCGCTGAC CCATCCGCGC CTGACACTCA ATGGGACGGC CGAGATCCTG CCCAATGGTT GCCCCGCGCA TGAGGAGATG GCCACGCATT ATCTGCGCCG CCACCCCAAG GCAAAGCTCT ACATTGGATT TGCCGATTTT CATTTTGTGC GTTTCCAGAT CCGGGAGGCG TTTTTGAACG GCGGCTTTGG CAAGGCCTAT CAACTCACGC CGGCGGATCT GGGCCTCGTG CCCTAG
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Protein sequence | MPQDTPPSEK PTSPIRPTDD EARTLAQSLI AEADFAALAT LSDEGHPVQS RVAFALDASG GPISLVSTLA QHAQAMAVRP QVSLLVGEPG EKGDPLTHPR LTLNGTAEIL PNGCPAHEEM ATHYLRRHPK AKLYIGFADF HFVRFQIREA FLNGGFGKAY QLTPADLGLV P
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