54 homologs were found in PanDaTox collection
for query gene Daci_4546 on replicon NC_010002
Organism: Delftia acidovorans SPH-1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010002  Daci_4546  pyridoxamine 5'-phosphate oxidase-related FMN-binding  100 
 
 		 194 aa  386  1e-106  Delftia acidovorans SPH-1  Bacteria  normal  0.158817  normal  0.600286 
 
 
-
 
NC_008781  Pnap_2042  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  51.19 
 
 		 199 aa  147  1.0000000000000001e-34  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.0340627  normal  1 
 
 
-
 
NC_007908  Rfer_1441  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  47.59 
 
 		 162 aa  130  9e-30  Rhodoferax ferrireducens T118  Bacteria  decreased coverage  0.00418233  n/a   
 
 
-
 
NC_008782  Ajs_2312  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  55.41 
 
 		 166 aa  125  3e-28  Acidovorax sp. JS42  Bacteria  normal  1  normal  0.885603 
 
 
-
 
NC_011992  Dtpsy_1547  pyridoxamine 5'-phosphate oxidase-related FMN-binding  55.41 
 
 		 166 aa  125  3e-28  Acidovorax ebreus TPSY  Bacteria  normal  0.610229  n/a   
 
 
-
 
NC_010524  Lcho_1064  pyridoxamine 5'-phosphate oxidase-related FMN-binding  48.53 
 
 		 171 aa  104  6e-22  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_007404  Tbd_0688  hypothetical protein  39.38 
 
 		 194 aa  87.8  9e-17  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  1  normal  0.365581 
 
 
-
 
NC_009456  VC0395_0330  heme-binding protein HutZ  29.17 
 
 		 176 aa  62.8  0.000000003  Vibrio cholerae O395  Bacteria  normal  0.0843987  n/a   
 
 
-
 
NC_007925  RPC_0598  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  35.63 
 
 		 247 aa  60.5  0.00000002  Rhodopseudomonas palustris BisB18  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009767  Rcas_3461  pyridoxamine 5'-phosphate oxidase-related FMN-binding  29.55 
 
 		 170 aa  59.3  0.00000003  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  hitchhiker  0.00895829 
 
 
-
 
NC_013457  VEA_001358  pyridoxamine 5'-phosphate oxidase-related putative heme iron utilization protein  28.57 
 
 		 176 aa  59.3  0.00000003  Vibrio sp. Ex25  Bacteria  normal  0.343115  n/a   
 
 
-
 
NC_009523  RoseRS_2721  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  30.66 
 
 		 171 aa  58.2  0.00000008  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009512  Pput_4366  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  30.56 
 
 		 243 aa  56.6  0.0000002  Pseudomonas putida F1  Bacteria  normal  0.809108  normal  0.082398 
 
 
-
 
NC_009784  VIBHAR_05247  hypothetical protein  27.98 
 
 		 176 aa  55.8  0.0000003  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_010501  PputW619_0965  pyridoxamine 5'-phosphate oxidase-related FMN-binding  30.56 
 
 		 243 aa  55.8  0.0000004  Pseudomonas putida W619  Bacteria  normal  0.499992  normal  0.821374 
 
 
-
 
NC_011989  Avi_3284  hypothetical protein  35.45 
 
 		 243 aa  54.3  0.000001  Agrobacterium vitis S4  Bacteria  normal  1  n/a   
 
 
-
 
NC_007413  Ava_2287  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  31.13 
 
 		 165 aa  54.3  0.000001  Anabaena variabilis ATCC 29413  Bacteria  normal  0.448208  normal  1 
 
 
-
 
NC_013422  Hneap_0671  pyridoxamine 5'-phosphate oxidase-related FMN-binding protein  28.16 
 
 		 167 aa  53.5  0.000002  Halothiobacillus neapolitanus c2  Bacteria  normal  1  n/a   
 
 
-
 
NC_010322  PputGB1_4491  pyridoxamine 5'-phosphate oxidase-related FMN-binding  30.87 
 
 		 276 aa  52  0.000005  Pseudomonas putida GB-1  Bacteria  normal  0.0201918  normal  1 
 
 
-
 
NC_007778  RPB_0462  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  37.09 
 
 		 244 aa  51.2  0.000008  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  0.45404 
 
 
-
 
NC_002947  PP_1358  hypothetical protein  29.86 
 
 		 289 aa  50.1  0.00002  Pseudomonas putida KT2440  Bacteria  hitchhiker  0.0010611  normal  0.192229 
 
 
-
 
NC_007964  Nham_0444  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  31.65 
 
 		 247 aa  50.1  0.00002  Nitrobacter hamburgensis X14  Bacteria  normal  1  n/a   
 
 
-
 
NC_008044  TM1040_2264  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  33.33 
 
 		 171 aa  49.7  0.00003  Ruegeria sp. TM1040  Bacteria  normal  0.159731  normal  1 
 
 
-
 
NC_011831  Cagg_1695  pyridoxamine 5'-phosphate oxidase-related FMN-binding  28.74 
 
 		 167 aa  48.9  0.00004  Chloroflexus aggregans DSM 9485  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007520  Tcr_0178  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  25.64 
 
 		 173 aa  48.5  0.00007  Thiomicrospira crunogena XCL-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_010506  Swoo_4002  pyridoxamine 5'-phosphate oxidase-related FMN-binding  27.78 
 
 		 197 aa  47.4  0.0001  Shewanella woodyi ATCC 51908  Bacteria  normal  1  normal  0.285219 
 
 
-
 
NC_009428  Rsph17025_0512  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  28.76 
 
 		 165 aa  46.6  0.0002  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  1  normal  0.0680495 
 
 
-
 
NC_007802  Jann_3613  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  28.85 
 
 		 184 aa  47  0.0002  Jannaschia sp. CCS1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008463  PA14_57040  hypothetical protein  29.33 
 
 		 244 aa  46.2  0.0003  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009667  Oant_1581  pyridoxamine 5'-phosphate oxidase-related FMN-binding  30.56 
 
 		 245 aa  45.1  0.0008  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.0647071  n/a   
 
 
-
 
NC_007958  RPD_0366  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  31.85 
 
 		 244 aa  44.7  0.001  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  hitchhiker  0.0042233 
 
 
-
 
NC_008228  Patl_1491  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  27.05 
 
 		 244 aa  44.7  0.001  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_009656  PSPA7_4959  hypothetical protein  29.86 
 
 		 244 aa  44.3  0.001  Pseudomonas aeruginosa PA7  Bacteria  normal  0.112474  n/a   
 
 
-
 
NC_011666  Msil_1374  pyridoxamine 5'-phosphate oxidase-related FMN-binding  30.7 
 
 		 256 aa  43.9  0.001  Methylocella silvestris BL2  Bacteria  n/a    normal  0.694327 
 
 
-
 
NC_011138  MADE_01539  uncharacterized metal-binding protein  25.83 
 
 		 243 aa  44.7  0.001  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.504021  n/a   
 
 
-
 
NC_009901  Spea_3325  pyridoxamine 5'-phosphate oxidase-related FMN-binding  27.74 
 
 		 189 aa  43.1  0.002  Shewanella pealeana ATCC 700345  Bacteria  normal  0.0502569  n/a   
 
 
-
 
NC_008309  HS_0722  heme binding protein  24.85 
 
 		 173 aa  43.5  0.002  Haemophilus somnus 129PT  Bacteria  normal  1  n/a   
 
 
-
 
NC_010725  Mpop_1180  pyridoxamine 5'-phosphate oxidase-related FMN-binding  28.93 
 
 		 270 aa  43.1  0.002  Methylobacterium populi BJ001  Bacteria  normal  1  normal  0.171584 
 
 
-
 
NC_011312  VSAL_I1748  heme uptake and utilization protein HuvZ  25 
 
 		 176 aa  43.9  0.002  Aliivibrio salmonicida LFI1238  Bacteria  normal  1  n/a   
 
 
-
 
NC_011663  Sbal223_3336  pyridoxamine 5'-phosphate oxidase-related FMN-binding  27.22 
 
 		 185 aa  43.5  0.002  Shewanella baltica OS223  Bacteria  normal  0.195481  normal  1 
 
 
-
 
NC_009049  Rsph17029_2234  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  30.16 
 
 		 164 aa  42.7  0.003  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  1  normal  0.957515 
 
 
-
 
NC_007493  RSP_0581  hypothetical protein  30.16 
 
 		 164 aa  42.4  0.004  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007492  Pfl01_4504  pyridoxamine 5'-phosphate oxidase-like, FMN-binding  27.78 
 
 		 243 aa  42.4  0.004  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  decreased coverage  0.000287779 
 
 
-
 
NC_007406  Nwi_0349  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  31.29 
 
 		 245 aa  42.4  0.004  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.334445  normal  0.250597 
 
 
-
 
NC_011757  Mchl_1401  pyridoxamine 5'-phosphate oxidase-related FMN-binding  29.68 
 
 		 271 aa  42.4  0.004  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.509564  normal  0.321093 
 
 
-
 
NC_004347  SO_3667  hypothetical protein  25.42 
 
 		 185 aa  42  0.005  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_010622  Bphy_0115  pyridoxamine 5'-phosphate oxidase-related FMN-binding  30.89 
 
 		 221 aa  42  0.005  Burkholderia phymatum STM815  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010511  M446_0224  pyridoxamine 5'-phosphate oxidase-related FMN-binding  29.11 
 
 		 260 aa  41.6  0.006  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  0.011733 
 
 
-
 
NC_009485  BBta_7366  hypothetical protein  31.41 
 
 		 242 aa  42  0.006  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.708194  normal  1 
 
 
-
 
NC_010505  Mrad2831_3090  pyridoxamine 5'-phosphate oxidase-related FMN-binding  29.11 
 
 		 261 aa  41.6  0.008  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.853398  normal  1 
 
 
-
 
NC_012560  Avin_13440  pyridoxamine 5-phosphate oxidase  29.86 
 
 		 245 aa  41.6  0.008  Azotobacter vinelandii DJ  Bacteria  normal  1  n/a   
 
 
-
 
NC_010172  Mext_1239  pyridoxamine 5'-phosphate oxidase-related FMN-binding  29.03 
 
 		 271 aa  41.2  0.009  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009636  Smed_2308  pyridoxamine 5'-phosphate oxidase-related FMN-binding  31.82 
 
 		 247 aa  41.2  0.01  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  0.547637 
 
 
-
 
NC_008254  Meso_2207  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  31.08 
 
 		 251 aa  41.2  0.01  Chelativorans sp. BNC1  Bacteria  normal  0.359427  n/a   
 
 
-
 
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