Gene Pfl01_4504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4504 
Symbol 
ID3717763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5079655 
End bp5080386 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content61% 
IMG OID 
Productpyridoxamine 5'-phosphate oxidase-like, FMN-binding 
Protein accessionYP_350232 
Protein GI77460725 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000287779 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
TTGAGCGTTG AAGCGGCTAA GAATGCCCGA GAATTGCTTC TCAAGGAATA CCGTGGCGTG 
CTGTCGACCC ACTCCAGATC GATGCCCGGT TTCCCGTTCG GCTCCGTGGT TCCCTACTGC
CTTGACGAGC AGGGCCGGCC GCTGATCCTG ATCAGCCGTA TCGCCCAGCA CACCCACAAC
CTGCAGAAAG ATCCGAAATG TTCGCTGCTG GTGGGTGAGC GCGAGGCCGA CGATGTGCAA
GCCGTTGGTC GCCTGACCTA TCTGGCCGAG GCGGAAAAAC TCGAAGACGC GGCCGCCATC
GAAGCTGCCG CCGAGCGCTA CTACCGTTAT TTCCCCGATT CGCAGAATTA CCACAAGGCC
CACGATTTCG ATTTCTGGGT GCTCAAACCG GTGCGTCATC GCTACATCGG CGGTTTTGGC
GCGATCCATT GGGTCGATCA CCTGACCCTG GCCAACCCGT TCGCCGGCAA GGCCGAAGTC
AGCATGGTCG AGCACATGAA CAGCGACCAC GCCAAGGCCA TTGCGCATTA CGTCGACCTC
GCCGGCCTGC CGAAAACCGT CCCGGCGCAA CTGGCCGGGA TCGACACCGA AGGCATGCAC
TTGCGCATCG GTCAGGCGCT GTACTGGCTG CCGTTTCAAG CGCCTTGTCA TACGCCGATA
CAAGTGCGCG AGGCCTTGGT TTCTCTGGCT CACGCCGAGG TCTGGCCAAA AAATGCGGGG
GCCGACGCTT GA
 
Protein sequence
MSVEAAKNAR ELLLKEYRGV LSTHSRSMPG FPFGSVVPYC LDEQGRPLIL ISRIAQHTHN 
LQKDPKCSLL VGEREADDVQ AVGRLTYLAE AEKLEDAAAI EAAAERYYRY FPDSQNYHKA
HDFDFWVLKP VRHRYIGGFG AIHWVDHLTL ANPFAGKAEV SMVEHMNSDH AKAIAHYVDL
AGLPKTVPAQ LAGIDTEGMH LRIGQALYWL PFQAPCHTPI QVREALVSLA HAEVWPKNAG
ADA