Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_3284 |
Symbol | |
ID | 7387450 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 2716250 |
End bp | 2716981 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643652180 |
Product | hypothetical protein |
Protein accession | YP_002550364 |
Protein GI | 222149407 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0748] Putative heme iron utilization protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCGACC GCCCCTCTCC CATCCGTCCA ACTGATGACG AGGCGCGGCG CCAGGCGCGG ACCCTGTTGC GCAGCGCCAC CCATGTTCCC CTGGGCGTTC TCGATCCGCA AACCGGTGGG CCTTTCGTCA GTCGCGTGCT GATGGGCACC ATGCCGGATG GAACGCTGAC CGTTCTGGTC TCACGCCTCT CGGCTCATAC CCGGGCCATG CTGGCCGATC CGCGCGTATC GCTGCTGGCC GGCGAACCCG GCAAGGGTGA TCCCCTCGCC TATCCGCGTC TCACCGTTCA ATGCCTTGCA AGCCCGGTGG ACCCCGATAG CGACATTCAT CAGGCGATGC GTTGCCGCTT TCTGGCCCGT CATCCCAAGG CAAAGCTCTA TATCGATTTT CCGGATTTTC TGTTTTTCCA GCTCATGCCG CAACGTGCCG CCATGAACGG CGGGTTCGGA AAAGCCTTCC TGCTGGATGG AGAGGATTTG TTGATTCGAA CAAAGCTTAC GTTCGCCGAC GGTAAAACCG AGGCTCAAAC CATACAAGAT TTAGGGTATG GACTTCTGCA AATCATAAAA AATCCCCCTT ATCATAAGGG GCAAAAGCCG AAGGGAAAAG TCACAATCTG CGGGTTGGAT GCGTCGGGAA TCGACTTTTT TTGGGGTAAA AGGCTGTTTC GATGCGAATT TGAGCGTGAA ATTGTGTCTT TGGACACACA CCCTTCACTC CAATCTAATT AA
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Protein sequence | MIDRPSPIRP TDDEARRQAR TLLRSATHVP LGVLDPQTGG PFVSRVLMGT MPDGTLTVLV SRLSAHTRAM LADPRVSLLA GEPGKGDPLA YPRLTVQCLA SPVDPDSDIH QAMRCRFLAR HPKAKLYIDF PDFLFFQLMP QRAAMNGGFG KAFLLDGEDL LIRTKLTFAD GKTEAQTIQD LGYGLLQIIK NPPYHKGQKP KGKVTICGLD ASGIDFFWGK RLFRCEFERE IVSLDTHPSL QSN
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