Gene Tcr_0178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0178 
Symbol 
ID3762489 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp211556 
End bp212077 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content43% 
IMG OID637784883 
Productpyridoxamine 5'-phosphate oxidase-related, FMN-binding 
Protein accessionYP_390448 
Protein GI78484523 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0748] Putative heme iron utilization protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGCAAC TCAAATCGTC TAAATGGTCG AAAACCACTT ATCAACAGTG TGCCGCGTTA 
ATACACTCTC AGCAAAGTCT TCTGTTATCG ACGCTTAGCG ATTCGAATAC ACCGCATGCC
AGCTATGCGC CTTTTATTCT GCATCAAGGA ACCTTCTACA TCTTTGTTTC GGCCCTAGCG
GAACACACTC AAAACTTATT GAATTACCCT CAAGCCAGTG TATTGATCGT GGAACCGGAA
GAAAATGCGG AAACCATCTT TGCTCGGCAG CGAATCCAAC TCCAAGCCAA ATCCCATCGT
ATTTCGCGAG AAGAAAAACA CTGGCAATCG ACACTGGATA CATTTGAATC AAATTTTGGC
GAAATCATCC AGACTTTACG AGCTCTACCG GATTTTCACT TGTTCCAACT TCGCCCCGTA
TCCGGTCTTT ACGTCAAAGG ATTTGGACAA GCTTATCCGT TAGAATCGGA ACAAATAAAA
GAATTATTTT CTTTCAAAAA TCAAAGAGTT GATTCCATTT GA
 
Protein sequence
MPQLKSSKWS KTTYQQCAAL IHSQQSLLLS TLSDSNTPHA SYAPFILHQG TFYIFVSALA 
EHTQNLLNYP QASVLIVEPE ENAETIFARQ RIQLQAKSHR ISREEKHWQS TLDTFESNFG
EIIQTLRALP DFHLFQLRPV SGLYVKGFGQ AYPLESEQIK ELFSFKNQRV DSI