Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_0178 |
Symbol | |
ID | 3762489 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | - |
Start bp | 211556 |
End bp | 212077 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637784883 |
Product | pyridoxamine 5'-phosphate oxidase-related, FMN-binding |
Protein accession | YP_390448 |
Protein GI | 78484523 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0748] Putative heme iron utilization protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 52 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGCAAC TCAAATCGTC TAAATGGTCG AAAACCACTT ATCAACAGTG TGCCGCGTTA ATACACTCTC AGCAAAGTCT TCTGTTATCG ACGCTTAGCG ATTCGAATAC ACCGCATGCC AGCTATGCGC CTTTTATTCT GCATCAAGGA ACCTTCTACA TCTTTGTTTC GGCCCTAGCG GAACACACTC AAAACTTATT GAATTACCCT CAAGCCAGTG TATTGATCGT GGAACCGGAA GAAAATGCGG AAACCATCTT TGCTCGGCAG CGAATCCAAC TCCAAGCCAA ATCCCATCGT ATTTCGCGAG AAGAAAAACA CTGGCAATCG ACACTGGATA CATTTGAATC AAATTTTGGC GAAATCATCC AGACTTTACG AGCTCTACCG GATTTTCACT TGTTCCAACT TCGCCCCGTA TCCGGTCTTT ACGTCAAAGG ATTTGGACAA GCTTATCCGT TAGAATCGGA ACAAATAAAA GAATTATTTT CTTTCAAAAA TCAAAGAGTT GATTCCATTT GA
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Protein sequence | MPQLKSSKWS KTTYQQCAAL IHSQQSLLLS TLSDSNTPHA SYAPFILHQG TFYIFVSALA EHTQNLLNYP QASVLIVEPE ENAETIFARQ RIQLQAKSHR ISREEKHWQS TLDTFESNFG EIIQTLRALP DFHLFQLRPV SGLYVKGFGQ AYPLESEQIK ELFSFKNQRV DSI
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