| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_54952 |
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| Symbol | |
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| ID | 7195109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011687 |
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| Strand | - |
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| Start bp | 278616 |
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| End bp | 280186 |
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| Gene Length | 1571 bp |
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| Protein Length | 415 aa |
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| Translation table | |
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| GC content | 55% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002183457 |
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| Protein GI | 219126423 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.417126 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | AACAAAACAA ACATAACGGT GAGACCGAAC CGAACGACGG GTGTTGTCTA CCTACCTACT
TACCTACCAC AAGGCTGTTC CCCGTAAACG TTGTCGACCC GTCCAGAGTG TTTCATCGAC
AACTCCTTAC GTATGAGTCG TTCCTGTTTG GTAGTTACGA CGCTCTTGCT GGCGGTGCTC
GTTGCTGTGA GCCTGCCAGG CTCGACGGAT GCCTTTGGCT CGGTCCGGAT CGTCGTTCCA
AGGACCAGTG TTCCCATGCA ATCAACAATA CCGCCGTTAC CTTACCGGAG CAGTTTATCG
TCATCCATGG CCACGGCTGT GAATGGAGGA GACTCGTCCA CTGCTTCGAC GGCGAACGGT
GCACACGATG ATGCGAACAA CAACGAGACG TTCACTCCCA ACCTCAACAT TCGTCTGAAC
GTATCGGAAA AGGCCCGGAC CGTGACGAGT GTGTGCGTCT CCGGGACCCT GTGTACCGTA
TCAGTACACG AGGGTATTGC GGGAGCTCCC TTTGGCTCGT TCGTCGATTA CGTACTGGAC
GATCAAGGTA ATCCGGTCTT GCTCATGAAC GAAATGAGTA TGCACACTAT CAATATTCAA
AACGCGGCAC AAACCCTCCT CGATGCCAGT GGCACAGCCA TTGGACCGGG CCCGTCCATG
GTCACGCTAT TTACCCAGCT CGGTTCCGGG ACGACGTCTC TCAGTCCGCC GCGGACCGCG
GCCGGCGGCG CCAGCGGTAC CGCCAAATCC AACAATCTAC AGGACGTTTC ACGTTGTTCG
TTGACGGGAA CCCTGTACAA AATCGACCCC GCAGTGGATT CGGACGTCGA TGCCATCCGT
ATGCGGTACT CACTGACCCA CACCTACGCC GACCAAGTCA TGGACAGTCC CAAATTTGCC
TTTTACCGAT TGGTACCGGA AAAAATATAC TTTGTGGGCG GCTTTGGCGT CATGGCCAAG
TGGGTGGATC CGGAAGACTA CGCCGCGGCC GCGCCGGATA TTCTGGCCAA GGAAGCCTCC
GCGATCGTGG CCAAGCTCAA CCGTGAACAC GGGGAAGACT TGCAAAACAC CGCCCGGCAT
TTGTTGCGGG TGGAAACCCC GTTGGAAGAC ATCCGCGTCA CCAACGTGGA TCGACTCGGC
GTTGATCTAC GGGTCACGTC CCAAAAGGGA TCCCGACGCA ACAAACTGCA AACGGACGAA
TTCCGTATCG GCTTTCGCAT TCCCGTTATT AGTGTCGAAG ACGCCAAATC AGAAATCCTC
AAGACCTTTC AAGAAGCCTG GGAGATTGGT AACGGTATGG ATTGGGGCGA AGCGAACGGG
AGCGACGGTG CCGCTACCTC GGTGCCCATT CTTAAAATTG CGGCCGACGG TTTGGAATAA
TGCCAGCGCG CAGCCGCCGG CAAGGTAGGG TTATTGCCCT GGTGAGCGCC ATCTAACGAA
AGACGTTCTA CTTCTTTTTT TGGAATGAAC CAACACGGGA TATTGTACTT CGTAGGAGAG
CCATTCGGCA TTGGGACCGT TTGGAATAGG TGGAAACTAG CGTATAGAAT AGGGCCAGGG
TTTGTCGTAG G
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| Protein sequence | MSRSCLVVTT LLLAVLVAVS LPGSTDAFGS VRIVVPRTSV PMQSTIPPLP YRSSLSSSMA
TAVNGGDSST ASTANGAHDD ANNNETFTPN LNIRLNVSEK ARTVTSVCVS GTLCTVSVHE
GIAGAPFGSF VDYVLDDQGN PVLLMNEMSM HTINIQNAAQ TLLDASGTAI GPGPSMVTLF
TQLGSGTTSL SPPRTAAGGA SGTAKSNNLQ DVSRCSLTGT LYKIDPAVDS DVDAIRMRYS
LTHTYADQVM DSPKFAFYRL VPEKIYFVGG FGVMAKWVDP EDYAAAAPDI LAKEASAIVA
KLNREHGEDL QNTARHLLRV ETPLEDIRVT NVDRLGVDLR VTSQKGSRRN KLQTDEFRIG
FRIPVISVED AKSEILKTFQ EAWEIGNGMD WGEANGSDGA ATSVPILKIA ADGLE
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