17 homologs were found in PanDaTox collection
for query gene Pmen_0565 on replicon NC_009439
Organism: Pseudomonas mendocina ymp



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009439  Pmen_0565  hypothetical protein  100 
 
 		 217 aa  451  1.0000000000000001e-126  Pseudomonas mendocina ymp  Bacteria  decreased coverage  0.0000578097  decreased coverage  3.51919e-17 
 
 
-
 
NC_012917  PC1_0863  hypothetical protein  56.68 
 
 		 218 aa  254  5e-67  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.522508  n/a   
 
 
-
 
NC_010322  PputGB1_5181  hypothetical protein  56.65 
 
 		 179 aa  208  5e-53  Pseudomonas putida GB-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011004  Rpal_2100  hypothetical protein  33.94 
 
 		 223 aa  103  2e-21  Rhodopseudomonas palustris TIE-1  Bacteria  unclonable  0.000000000059812  n/a   
 
 
-
 
NC_011662  Tmz1t_3595  hypothetical protein  27.83 
 
 		 224 aa  79.3  0.00000000000004  Thauera sp. MZ1T  Bacteria  unclonable  0.00000000317158  n/a   
 
 
-
 
NC_009719  Plav_2928  hypothetical protein  28.37 
 
 		 214 aa  73.6  0.000000000002  Parvibaculum lavamentivorans DS-1  Bacteria  unclonable  0.0000000000000293349  hitchhiker  0.000101363 
 
 
-
 
NC_009523  RoseRS_0296  hypothetical protein  28.7 
 
 		 226 aa  73.6  0.000000000002  Roseiflexus sp. RS-1  Bacteria  decreased coverage  0.0000854832  normal  0.0172701 
 
 
-
 
NC_007404  Tbd_1490  hypothetical protein  29.14 
 
 		 226 aa  73.2  0.000000000003  Thiobacillus denitrificans ATCC 25259  Bacteria  decreased coverage  0.000183047  normal  1 
 
 
-
 
NC_008752  Aave_0160  hypothetical protein  27.98 
 
 		 212 aa  71.2  0.00000000001  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0163959  decreased coverage  0.000000325774 
 
 
-
 
NC_008786  Veis_3134  hypothetical protein  62 
 
 		 134 aa  67.8  0.0000000001  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.155985  normal  0.0526505 
 
 
-
 
NC_008340  Mlg_0502  hypothetical protein  47.37 
 
 		 96 aa  64.7  0.000000001  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009565  TBFG_10058  hypothetical protein  25.24 
 
 		 230 aa  63.9  0.000000002  Mycobacterium tuberculosis F11  Bacteria  decreased coverage  2.41088e-98  normal  0.757515 
 
 
-
 
NC_009438  Sputcn32_3528  hypothetical protein  29.03 
 
 		 212 aa  60.1  0.00000002  Shewanella putrefaciens CN-32  Bacteria  normal  0.410138  n/a   
 
 
-
 
NC_010814  Glov_2199  hypothetical protein  28.77 
 
 		 213 aa  55.1  0.0000007  Geobacter lovleyi SZ  Bacteria  normal  1  n/a   
 
 
-
 
NC_011666  Msil_3573  hypothetical protein  26.27 
 
 		 217 aa  52.4  0.000005  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_012912  Dd1591_0935  hypothetical protein  24.19 
 
 		 215 aa  46.2  0.0004  Dickeya zeae Ech1591  Bacteria  normal  0.655564  n/a   
 
 
-
 
NC_010085  Nmar_1158  hypothetical protein  35.14 
 
 		 392 aa  42.4  0.006  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal  1 
 
 
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