15 homologs were found in PanDaTox collection
for query gene Tbd_1490 on replicon NC_007404
Organism: Thiobacillus denitrificans ATCC 25259



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007404  Tbd_1490  hypothetical protein  100 
 
 
226 aa  469  1.0000000000000001e-131  Thiobacillus denitrificans ATCC 25259  Bacteria  decreased coverage  0.000183047  normal 
 
 
-
 
NC_011662  Tmz1t_3595  hypothetical protein  70.98 
 
 
224 aa  319  1.9999999999999998e-86  Thauera sp. MZ1T  Bacteria  unclonable  0.00000000317158  n/a   
 
 
-
 
NC_011004  Rpal_2100  hypothetical protein  44.84 
 
 
223 aa  196  3e-49  Rhodopseudomonas palustris TIE-1  Bacteria  unclonable  0.000000000059812  n/a   
 
 
-
 
NC_009523  RoseRS_0296  hypothetical protein  30.17 
 
 
226 aa  84  0.000000000000002  Roseiflexus sp. RS-1  Bacteria  decreased coverage  0.0000854832  normal  0.0172701 
 
 
-
 
NC_012917  PC1_0863  hypothetical protein  28.25 
 
 
218 aa  82.8  0.000000000000004  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.522508  n/a   
 
 
-
 
NC_010322  PputGB1_5181  hypothetical protein  29.26 
 
 
179 aa  80.9  0.00000000000001  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_0160  hypothetical protein  30.04 
 
 
212 aa  75.1  0.0000000000009  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0163959  decreased coverage  0.000000325774 
 
 
-
 
NC_009439  Pmen_0565  hypothetical protein  29.14 
 
 
217 aa  73.2  0.000000000003  Pseudomonas mendocina ymp  Bacteria  decreased coverage  0.0000578097  decreased coverage  3.51919e-17 
 
 
-
 
NC_009719  Plav_2928  hypothetical protein  26.2 
 
 
214 aa  67.4  0.0000000002  Parvibaculum lavamentivorans DS-1  Bacteria  unclonable  0.0000000000000293349  hitchhiker  0.000101363 
 
 
-
 
NC_009565  TBFG_10058  hypothetical protein  26.27 
 
 
230 aa  62.8  0.000000005  Mycobacterium tuberculosis F11  Bacteria  decreased coverage  2.41088e-98  normal  0.757515 
 
 
-
 
NC_012912  Dd1591_0935  hypothetical protein  26.61 
 
 
215 aa  60.5  0.00000002  Dickeya zeae Ech1591  Bacteria  normal  0.655564  n/a   
 
 
-
 
NC_009438  Sputcn32_3528  hypothetical protein  26.92 
 
 
212 aa  57  0.0000002  Shewanella putrefaciens CN-32  Bacteria  normal  0.410138  n/a   
 
 
-
 
NC_010814  Glov_2199  hypothetical protein  27.67 
 
 
213 aa  54.7  0.000001  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_011666  Msil_3573  hypothetical protein  23.01 
 
 
217 aa  45.4  0.0007  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_010085  Nmar_1158  hypothetical protein  30.12 
 
 
392 aa  42  0.008  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal 
 
 
-
 
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