Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_2928 |
Symbol | |
ID | 5455875 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 3128152 |
End bp | 3128796 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640878511 |
Product | hypothetical protein |
Protein accession | YP_001414192 |
Protein GI | 154253368 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000000000293349 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.000101363 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCCATCC CTGCACAGCC GAAGATTTAC CACATTGTGC ACGTCCAAAA TCTCGCGTCG ATCGTGACGG ATGGCCATTT GTGGTCAGAC GCGACCATGG TCAATCGACC ACCTGGAGGA ACAGTGATCG GAATGGGTGG CATAAAGCTG CGGCGATTGC GTCTTCCCGT GACGTGCCAC CAGGGAACAC ATGTTGGCGA CTTTGTCCCG TTCTATTTCT GTTCTAGATC AATTATGCTG TACGTGCTTC ATTGCGCGAA CCATGCGGAA CTAACTTATC GAGGTGGGCA GCAGCCCATT GTTCATCTGG AAGCAGACCT TTACCGGTCC GTTCGATGGG CAGAAGAAAA TGGGTCACGT TGGGCATTTT CTCTCTCGAA CGCGGGTGCT GCCTATACAC AGTTTCGTTC AAAGAGAGAA CAACTAAGCG AAGTCAACTG GGAGGCTGTG AGAGCTACCG ATTTTCGACC AGCGGACGTC AAAGAGGGTA AGCAGGCAGA ATTTTTGGTT GAACGCTCCT TCCCGTGGCA TCTGGTAGAG CGTGTTGGAG TTCACTCGCA AGCTGTTGTG GATCAAGTGT CTACCGCAAT GCGGGGTGTG CGACATCGGC CTCAGATCGA AATCAGGAAG GACTGGTACT TTTGA
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Protein sequence | MAIPAQPKIY HIVHVQNLAS IVTDGHLWSD ATMVNRPPGG TVIGMGGIKL RRLRLPVTCH QGTHVGDFVP FYFCSRSIML YVLHCANHAE LTYRGGQQPI VHLEADLYRS VRWAEENGSR WAFSLSNAGA AYTQFRSKRE QLSEVNWEAV RATDFRPADV KEGKQAEFLV ERSFPWHLVE RVGVHSQAVV DQVSTAMRGV RHRPQIEIRK DWYF
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