Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_2100 |
Symbol | |
ID | 6409760 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 2273187 |
End bp | 2273858 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642711985 |
Product | hypothetical protein |
Protein accession | YP_001991097 |
Protein GI | 192290492 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000000059812 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCACCTC CAATTCCGAC AGCCATTTTC CACATCACTG CGATCGCCAA TCTGGACTCG ATCGCGAAGC AGGGCGCCCT GCTTTCAAAG AACGAGGCTG CGGCGCGCGG ATTGGTCGCG GCAAATATCG CTTATGACCA TATTCAGGGA CGCCGCGCCG TACGCACGGT GCCCATCGCG CCCGGCGGAA CGTTGCACGA TTACGTGCCG TTCTATTTTG CGCCACGCTC CCCGATGTTG TTCACCATCA ACCAAGGCAA CGTACCCGAC TGTATCTATC GACAGGACGA TATTGTACAT CTCGCGACGA CCGCTCAAAC CGTCGCGGAC ACGGGGCAGC AGATTGTATT CTCAGACATC CACGCGGCCC TGGATTACGC TAGGTTTTTC AGTGATCTCG GCAGCCTGAC GGAGATCGAC TGGAGAATCT TCTTCGAGCC GCCACGTCTC GAAGGCTATT GTAAATTCTG GCAAAATCGC CAGATTCCCA TTCATCATTT ACGGCGTCTG GAGATTCGGC AGGCGGAGTT CCTTGTGCAT GGCGAGCTGC CGATTGCCGC GATCTCAGAA ATTGGCGTAA AAACCGCCCA AGCAGCTGCG CAAGTCGAAC AGGCAGTCGC TGGTTCTGGA TGGACTCCCA CGGTCAGGGT GGTGCCCGGC TGGTACTTCT AA
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Protein sequence | MPPPIPTAIF HITAIANLDS IAKQGALLSK NEAAARGLVA ANIAYDHIQG RRAVRTVPIA PGGTLHDYVP FYFAPRSPML FTINQGNVPD CIYRQDDIVH LATTAQTVAD TGQQIVFSDI HAALDYARFF SDLGSLTEID WRIFFEPPRL EGYCKFWQNR QIPIHHLRRL EIRQAEFLVH GELPIAAISE IGVKTAQAAA QVEQAVAGSG WTPTVRVVPG WYF
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