Gene Rpal_2100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_2100 
Symbol 
ID6409760 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp2273187 
End bp2273858 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content57% 
IMG OID642711985 
Producthypothetical protein 
Protein accessionYP_001991097 
Protein GI192290492 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000059812 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCACCTC CAATTCCGAC AGCCATTTTC CACATCACTG CGATCGCCAA TCTGGACTCG 
ATCGCGAAGC AGGGCGCCCT GCTTTCAAAG AACGAGGCTG CGGCGCGCGG ATTGGTCGCG
GCAAATATCG CTTATGACCA TATTCAGGGA CGCCGCGCCG TACGCACGGT GCCCATCGCG
CCCGGCGGAA CGTTGCACGA TTACGTGCCG TTCTATTTTG CGCCACGCTC CCCGATGTTG
TTCACCATCA ACCAAGGCAA CGTACCCGAC TGTATCTATC GACAGGACGA TATTGTACAT
CTCGCGACGA CCGCTCAAAC CGTCGCGGAC ACGGGGCAGC AGATTGTATT CTCAGACATC
CACGCGGCCC TGGATTACGC TAGGTTTTTC AGTGATCTCG GCAGCCTGAC GGAGATCGAC
TGGAGAATCT TCTTCGAGCC GCCACGTCTC GAAGGCTATT GTAAATTCTG GCAAAATCGC
CAGATTCCCA TTCATCATTT ACGGCGTCTG GAGATTCGGC AGGCGGAGTT CCTTGTGCAT
GGCGAGCTGC CGATTGCCGC GATCTCAGAA ATTGGCGTAA AAACCGCCCA AGCAGCTGCG
CAAGTCGAAC AGGCAGTCGC TGGTTCTGGA TGGACTCCCA CGGTCAGGGT GGTGCCCGGC
TGGTACTTCT AA
 
Protein sequence
MPPPIPTAIF HITAIANLDS IAKQGALLSK NEAAARGLVA ANIAYDHIQG RRAVRTVPIA 
PGGTLHDYVP FYFAPRSPML FTINQGNVPD CIYRQDDIVH LATTAQTVAD TGQQIVFSDI
HAALDYARFF SDLGSLTEID WRIFFEPPRL EGYCKFWQNR QIPIHHLRRL EIRQAEFLVH
GELPIAAISE IGVKTAQAAA QVEQAVAGSG WTPTVRVVPG WYF