15 homologs were found in PanDaTox collection
for query gene PC1_0863 on replicon NC_012917
Organism: Pectobacterium carotovorum subsp. carotovorum PC1



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_012917  PC1_0863  hypothetical protein  100 
 
 		 218 aa  455  1e-127  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.522508  n/a   
 
 
-
 
NC_009439  Pmen_0565  hypothetical protein  56.68 
 
 		 217 aa  254  5e-67  Pseudomonas mendocina ymp  Bacteria  decreased coverage  0.0000578097  decreased coverage  3.51919e-17 
 
 
-
 
NC_010322  PputGB1_5181  hypothetical protein  59.09 
 
 		 179 aa  216  2e-55  Pseudomonas putida GB-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011662  Tmz1t_3595  hypothetical protein  29.86 
 
 		 224 aa  92  5e-18  Thauera sp. MZ1T  Bacteria  unclonable  0.00000000317158  n/a   
 
 
-
 
NC_011004  Rpal_2100  hypothetical protein  32 
 
 		 223 aa  92  6e-18  Rhodopseudomonas palustris TIE-1  Bacteria  unclonable  0.000000000059812  n/a   
 
 
-
 
NC_007404  Tbd_1490  hypothetical protein  28.25 
 
 		 226 aa  82.8  0.000000000000003  Thiobacillus denitrificans ATCC 25259  Bacteria  decreased coverage  0.000183047  normal  1 
 
 
-
 
NC_009523  RoseRS_0296  hypothetical protein  28.96 
 
 		 226 aa  66.2  0.0000000003  Roseiflexus sp. RS-1  Bacteria  decreased coverage  0.0000854832  normal  0.0172701 
 
 
-
 
NC_009565  TBFG_10058  hypothetical protein  25.39 
 
 		 230 aa  66.2  0.0000000003  Mycobacterium tuberculosis F11  Bacteria  decreased coverage  2.41088e-98  normal  0.757515 
 
 
-
 
NC_008340  Mlg_0502  hypothetical protein  64.1 
 
 		 96 aa  63.2  0.000000003  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008786  Veis_3134  hypothetical protein  56.25 
 
 		 134 aa  62.8  0.000000004  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.155985  normal  0.0526505 
 
 
-
 
NC_009719  Plav_2928  hypothetical protein  26.48 
 
 		 214 aa  62.4  0.000000004  Parvibaculum lavamentivorans DS-1  Bacteria  unclonable  0.0000000000000293349  hitchhiker  0.000101363 
 
 
-
 
NC_008752  Aave_0160  hypothetical protein  26.36 
 
 		 212 aa  55.8  0.0000005  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0163959  decreased coverage  0.000000325774 
 
 
-
 
NC_010814  Glov_2199  hypothetical protein  32.63 
 
 		 213 aa  49.7  0.00003  Geobacter lovleyi SZ  Bacteria  normal  1  n/a   
 
 
-
 
NC_009438  Sputcn32_3528  hypothetical protein  27.06 
 
 		 212 aa  48.5  0.00008  Shewanella putrefaciens CN-32  Bacteria  normal  0.410138  n/a   
 
 
-
 
NC_012912  Dd1591_0935  hypothetical protein  25.79 
 
 		 215 aa  42.7  0.005  Dickeya zeae Ech1591  Bacteria  normal  0.655564  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>