13 homologs were found in PanDaTox collection
for query gene PputGB1_5181 on replicon NC_010322
Organism: Pseudomonas putida GB-1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010322  PputGB1_5181  hypothetical protein  100 
 
 		 179 aa  374  1e-103  Pseudomonas putida GB-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012917  PC1_0863  hypothetical protein  59.09 
 
 		 218 aa  216  2e-55  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.522508  n/a   
 
 
-
 
NC_009439  Pmen_0565  hypothetical protein  56.65 
 
 		 217 aa  208  4e-53  Pseudomonas mendocina ymp  Bacteria  decreased coverage  0.0000578097  decreased coverage  3.51919e-17 
 
 
-
 
NC_011004  Rpal_2100  hypothetical protein  34.29 
 
 		 223 aa  88.2  6e-17  Rhodopseudomonas palustris TIE-1  Bacteria  unclonable  0.000000000059812  n/a   
 
 
-
 
NC_007404  Tbd_1490  hypothetical protein  29.26 
 
 		 226 aa  80.9  0.000000000000009  Thiobacillus denitrificans ATCC 25259  Bacteria  decreased coverage  0.000183047  normal  1 
 
 
-
 
NC_011662  Tmz1t_3595  hypothetical protein  29.19 
 
 		 224 aa  73.6  0.000000000002  Thauera sp. MZ1T  Bacteria  unclonable  0.00000000317158  n/a   
 
 
-
 
NC_008340  Mlg_0502  hypothetical protein  49.12 
 
 		 96 aa  60.8  0.000000009  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009523  RoseRS_0296  hypothetical protein  26.23 
 
 		 226 aa  57  0.0000001  Roseiflexus sp. RS-1  Bacteria  decreased coverage  0.0000854832  normal  0.0172701 
 
 
-
 
NC_009719  Plav_2928  hypothetical protein  25.68 
 
 		 214 aa  54.7  0.0000007  Parvibaculum lavamentivorans DS-1  Bacteria  unclonable  0.0000000000000293349  hitchhiker  0.000101363 
 
 
-
 
NC_009565  TBFG_10058  hypothetical protein  23.35 
 
 		 230 aa  50.4  0.00001  Mycobacterium tuberculosis F11  Bacteria  decreased coverage  2.41088e-98  normal  0.757515 
 
 
-
 
NC_009438  Sputcn32_3528  hypothetical protein  26.58 
 
 		 212 aa  46.6  0.0002  Shewanella putrefaciens CN-32  Bacteria  normal  0.410138  n/a   
 
 
-
 
NC_008752  Aave_0160  hypothetical protein  23.78 
 
 		 212 aa  42.4  0.003  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0163959  decreased coverage  0.000000325774 
 
 
-
 
NC_010814  Glov_2199  hypothetical protein  27.7 
 
 		 213 aa  41.2  0.007  Geobacter lovleyi SZ  Bacteria  normal  1  n/a   
 
 
-
 
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