Gene RoseRS_0296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0296 
Symbol 
ID5207231 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp377692 
End bp378372 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content51% 
IMG OID640593922 
Producthypothetical protein 
Protein accessionYP_001274678 
Protein GI148654473 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000854832 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0172701 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGAA TTATGATTCC GACGTTTCCG AAAAAGCCCA TTCCGGAAAA TCCAAAAATC 
TACCATATTA CTCACGTTGA CAATATACGA AACATTGTAT CAACAGGAGG GCTGCTGTCT
GACGCGCGCA TACTTCAGCA GGGCGGGCCG ACGCAAATGA TCGGTCTATC CAACATCAAG
CGACGTCGGA TTGAAGAACT GGAGGTTCGA TGTCATCCTG GCACAAAAGT GGGTGAATAT
GTCCCTTTTT ATTTCTGCCC CCGTTCGATT ATGCTGTATG TGATTCACCG TGCAGACCAC
CCCGAACTTA TGTATCGCGG AGGGCAAGAT TCGATCGCGC ATCTTGAGGC CGATCTTCAT
CAAGTTGTAG ACTGGGCTGA CAATAACGGC GTTCGCTGGG CATTTTCACT CTCCAATGCG
GGCGCCCGCT ATACGCAGTT TCGGTCTAAT CTGCGCTATC TTCACGAACT CGATTGGGAT
GCCATCGCCG CGACGGATTT CCGTGATTCC GATGTCAAGG AGGGGAAACA GGCAGAATTC
CTTGTCCATG GCTTCTTTCC GTTCGATCTC GTTGAGCGGA TTGGTGTGCA TCGTGCTAAT
ATCTGGAATA AAGTACGCAG CGTGCTGGCA GGGAGCGGCT ATACTCCTCG CGTTGAAGTG
CGCGACGACT GGTATTTTTG A
 
Protein sequence
MARIMIPTFP KKPIPENPKI YHITHVDNIR NIVSTGGLLS DARILQQGGP TQMIGLSNIK 
RRRIEELEVR CHPGTKVGEY VPFYFCPRSI MLYVIHRADH PELMYRGGQD SIAHLEADLH
QVVDWADNNG VRWAFSLSNA GARYTQFRSN LRYLHELDWD AIAATDFRDS DVKEGKQAEF
LVHGFFPFDL VERIGVHRAN IWNKVRSVLA GSGYTPRVEV RDDWYF