| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_1158 |
|---|
| Symbol | |
|---|
| ID | 5773209 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosopumilus maritimus SCM1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010085 |
|---|
| Strand | - |
|---|
| Start bp | 1059089 |
|---|
| End bp | 1060267 |
|---|
| Gene Length | 1179 bp |
|---|
| Protein Length | 392 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 641316801 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001582492 |
|---|
| Protein GI | 161528666 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2110] Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATGAAT TCAAAATTTA TACTCCTGAC TTGAGCCAAT ACCTTTTCTA CATTACACAT
ATTGACAATA TTCCGTCCAT GCTGCAAAAT GGAATTCTCT CTCATGATCA AATTGTAAAA
CAAAAACTCG AATACACTTC AATTTATGAC AGCGATATTG TTTCCAGTAG AAGAGAAAAA
ACCGCTAATG GGAAAAGTCT TTGGTATTTT GCTAATCTGT ATTTCCAACC TCGAAATCCT
ATGCTGTACC GTGTAACTAT GGAAAAATCT CCTGATTGCA TAGCTGTTGT CGCTGTTGAT
AAAAAAATCC TTACTACTCC TAACACAATT ATCACTGACG GAAATGCTGC AAATGGTCCT
ACACATTTCT ATCCTAATAC TGAATTCAAA ACTATTGAAC GACAAATTAA CAGAATTACT
AGTTTACAGT GGTGGACAGA TAGTAATGCT ACTAAAAGAC AAATTATGGC TGAATGTCTA
GTTCCAGAAC GAATTCCACC TGAATTCATT CGTGCAATTT ATGTTAGTAA TCATACTCTT
GCAGACGAAA TACGAAATTC TATGTCTTCT AGCATTTCAA TAATTCCTGA ACCTTCTATG
TTCTTCCAAC CTGTAAGACA AATTCCACTC ACTTCAAATC TTTCATTGGT AGAAGGAGAT
TTGTTTTTCT CAAAAATGCA AACCCTTACT GTAAGTGTAA ATTGTATTGG AGTAATGGGA
AAAGGGTTGG CCTCTAGAGC AAAATATCAA TTCCCAGATG TTTATGTACA CTATCAAGAT
CAGTGTAAAA GAAAAACACT TCGAATGGGC AAGCCTGTAT TGTATCAACG TGAAGCCCCA
TATCATGAAC AAATTGCAGA TGATCCTAGC TCTTTAGGAA ATAAAAAAGA CACATGGTTT
TTGCTTTTTG CTACAAAACA ACACTGGCGA GATAATAGCG ATATTGAGGG TATAGAGCAG
GGATTAAAAT GGCTTTTAGA TAACTATGAA CAAAAAGGAA TAGAATCACT TGCAATTCCT
GCACTAGGTT GTGGTTTAGG ACGTCTAAGT TGGGAAGATG TTGGACCCAT ACTTTGCAAG
TATCTATCTC AAATGAACAT ACCCGTGTGG ATATATTTGC CTGCAGAAAA ACAACTTTCT
AATAATTTAC TTACAAAGGA GTTTCTATTG GATAGTTAA
|
|---|
| Protein sequence | MDEFKIYTPD LSQYLFYITH IDNIPSMLQN GILSHDQIVK QKLEYTSIYD SDIVSSRREK
TANGKSLWYF ANLYFQPRNP MLYRVTMEKS PDCIAVVAVD KKILTTPNTI ITDGNAANGP
THFYPNTEFK TIERQINRIT SLQWWTDSNA TKRQIMAECL VPERIPPEFI RAIYVSNHTL
ADEIRNSMSS SISIIPEPSM FFQPVRQIPL TSNLSLVEGD LFFSKMQTLT VSVNCIGVMG
KGLASRAKYQ FPDVYVHYQD QCKRKTLRMG KPVLYQREAP YHEQIADDPS SLGNKKDTWF
LLFATKQHWR DNSDIEGIEQ GLKWLLDNYE QKGIESLAIP ALGCGLGRLS WEDVGPILCK
YLSQMNIPVW IYLPAEKQLS NNLLTKEFLL DS
|
|---|
| |