Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_0565 |
Symbol | |
ID | 5108189 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 615763 |
End bp | 616416 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640501778 |
Product | hypothetical protein |
Protein accession | YP_001186067 |
Protein GI | 146305602 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0000578097 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 3.51919e-17 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCCTAACC ACTACCCCAA CCTGAATCCG GAGAAGGCGC TGATCTGGCG TATTGTCCAC CGCGATAATC TGGTGTGGAT TCTGGATAAC GGGCTGCACT GCGCCTCGGC GAATGTGCAG GCCCCGAATT ATGTGGTGAT TGGCAACGTC GATCTGATCA GCCGGAGGCG TGAGCGCACG GTGCCGGTTG CGCCGGGCGG CACCTTGTCC GACTACGTGC CGTTCTATTT CACCCCGTTC TCGCCCATGA TGTACAACAT CCATACTGGT CGCGGTGAGG TGCAGCAGCG GCACAACGAG GAAATCTGCA TCCTGGTGTC GAGCCTGCGT CGAGTGCATG AGCTAGGGTT GGGTTTTGCC TTTACGGATC GGCATGCCTA CACCCCGCTG GCCAGGTACT TCAATGAGCT GGATTTGCTT GAACAGTTGG ATTGGCCGTT GCTGCAAGCG CGCAATTTTT CGCGCAACCC GGATGATCCG GAGCAGATCG AGCGATACCA GGCCGAAGCC CTGGTACACC GCTATTTGCC CATAGAGGGC TTGCTCGGCG TGGTGTGTTT TACCCAAGCC GTGAAAGATC GACTGGATGC ACAGGCCCAG GCTAAAGGCT TGAAACTGGA TATACGTGTT ATGCCTCAGT GGTACTTCCG ATGA
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Protein sequence | MPNHYPNLNP EKALIWRIVH RDNLVWILDN GLHCASANVQ APNYVVIGNV DLISRRRERT VPVAPGGTLS DYVPFYFTPF SPMMYNIHTG RGEVQQRHNE EICILVSSLR RVHELGLGFA FTDRHAYTPL ARYFNELDLL EQLDWPLLQA RNFSRNPDDP EQIERYQAEA LVHRYLPIEG LLGVVCFTQA VKDRLDAQAQ AKGLKLDIRV MPQWYFR
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