19 homologs were found in PanDaTox collection
for query gene Haur_2479 on replicon NC_009972
Organism: Herpetosiphon aurantiacus ATCC 23779



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009972  Haur_2479  CRISPR-associated RAMP Csm5 family protein  100 
 
 
362 aa  744    Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_3447  CRISPR-associated RAMP protein, Csm5 family  29.52 
 
 
471 aa  106  8e-22  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal  0.186008 
 
 
-
 
NC_012034  Athe_2700  CRISPR-associated RAMP protein, Csm5 family  27.41 
 
 
390 aa  88.6  2e-16  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_1981  CRISPR-associated RAMP Csm5 family protein  28 
 
 
476 aa  87.8  3e-16  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.244308 
 
 
-
 
NC_013501  Rmar_1633  CRISPR-associated RAMP protein, Csm5 family  25.69 
 
 
485 aa  77.4  0.0000000000004  Rhodothermus marinus DSM 4252  Bacteria  decreased coverage  0.0000163126  n/a   
 
 
-
 
NC_009616  Tmel_1674  CRISPR-associated RAMP Csm5 family protein  23.18 
 
 
353 aa  75.9  0.000000000001  Thermosipho melanesiensis BI429  Bacteria  normal  0.901558  n/a   
 
 
-
 
NC_009635  Maeo_1079  CRISPR-associated RAMP Csm5 family protein  22.31 
 
 
385 aa  68.9  0.0000000001  Methanococcus aeolicus Nankai-3  Archaea  normal  0.485474  n/a   
 
 
-
 
NC_008346  Swol_1752  hypothetical protein  25.53 
 
 
380 aa  65.5  0.000000001  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_0703  CRISPR-associated RAMP protein, Csm5 family  24.43 
 
 
376 aa  61.2  0.00000002  Meiothermus silvanus DSM 9946  Bacteria  normal  0.932167  hitchhiker  0.00582507 
 
 
-
 
NC_002976  SERP2457  CRISPR-associated Csm5 family protein  18.43 
 
 
340 aa  60.1  0.00000006  Staphylococcus epidermidis RP62A  Bacteria  normal  0.0486574  n/a   
 
 
-
 
NC_013502  Rmar_2822  CRISPR-associated RAMP protein, Csm5 family  22.98 
 
 
550 aa  59.7  0.00000008  Rhodothermus marinus DSM 4252  Bacteria  normal  0.0845679  n/a   
 
 
-
 
NC_009718  Fnod_1392  CRISPR-associated RAMP Csm5 family protein  23.34 
 
 
381 aa  57.8  0.0000003  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_008532  STER_0977  hypothetical protein  26.64 
 
 
357 aa  53.5  0.000005  Streptococcus thermophilus LMD-9  Bacteria  normal  n/a   
 
 
-
 
NC_013926  Aboo_1024  CRISPR-associated RAMP protein, Csm5 family  22.22 
 
 
380 aa  52.4  0.00001  Aciduliprofundum boonei T469  Archaea  decreased coverage  0.00000034991  n/a   
 
 
-
 
NC_013946  Mrub_0219  Csm5 family CRISPR-associated RAMP protein  24.32 
 
 
376 aa  52  0.00002  Meiothermus ruber DSM 1279  Bacteria  normal  0.684948  normal 
 
 
-
 
NC_009565  TBFG_12833  hypothetical protein  23.95 
 
 
375 aa  51.2  0.00003  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_0740  CRISPR-associated RAMP Csm5 family protein  24.35 
 
 
391 aa  45.4  0.001  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_010831  Cphamn1_1256  CRISPR-associated RAMP protein, Csm5 family  24.37 
 
 
380 aa  43.9  0.004  Chlorobium phaeobacteroides BS1  Bacteria  normal  hitchhiker  0.00374145 
 
 
-
 
NC_011661  Dtur_0608  CRISPR-associated RAMP protein, Csm5 family  22.99 
 
 
381 aa  43.1  0.008  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>