Gene Mrub_0219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrub_0219 
Symbol 
ID8878287 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus ruber DSM 1279 
KingdomBacteria 
Replicon accessionNC_013946 
Strand
Start bp193581 
End bp194711 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content63% 
IMG OID 
ProductCsm5 family CRISPR-associated RAMP protein 
Protein accessionYP_003506019 
Protein GI291294621 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.684948 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTTCA TGGAGGCTTA CCGCCTCGAG CTCGAGCTCC TGGGCCCCGT TCACGTGGGC 
ACCGGGGAGG CTTTCCCGGC CTACAGCTAC TTGGTGGACG AGGCAAGGAA AGAGGTACTG
ATCCTGGATT CTGGCCGCCT GCTGGAGTTG CTCTCCGAGA AGCAGAGGGA CAACTACCTG
CAAGCCGTGG CCCAAGGCCC CAAGCAGGCC CAGAACACCT TGCGATCGCT CTGGGGCAGC
GGCCTGCTGG ACCTCACCCC GGCTGTTCTG CGGCGGGTAG CGGCTAGCCC AGCCTTCATC
AACACCGTCA AGAGTGCCAC CGACGCCGCG GGCCTCGAGT TCCGCACCCT GCCCAGGAGC
CCGCTGGGGG CCTACCTGCC GGGCTCGAGC GTCAAGGGGG CTTTGCGCAC GGCCTGGATG
TTCCAGCGAA TCCTAAAACG GGGTCAGGAT ATCGGGTATC ACGATCGCTG GACATGGGGC
AAGAAACCCC CGAAAGACGA ATGGCCCCTC GTCCAGCCTC CCAAAAGCAT CAACACCCGG
GTTGCCCAGG AGTTTGAGGC CCTGGTGCTG GGCTACGCCA CCGACCGTGG CCCTAACCTG
CACCGTGACC CCTTCCGCCA GGTGCGTGTG GGAGACGGTG AGCCCTGCAA GAATCTGCTG
CTCAACCGCA TCGGGGTGTT TCATCCCGAG GGCAAGATGG ATGGCACGGT GTTGCTGGCC
GAGACCTTCC GCAGCAAGAC CCGGCTCGCA GCGCTGGTGC GGCTTCACAC TGGGCTGGCC
CGACAGACCC ACAACGACAC CGTTTCTCAC GCCATCTCGG CCCAGGCACT GATCAAAGCG
TGCCAGGAGT ACTACCAGGA AGTCGCGGCC AGGGAAAAGG AATTTGCCGA GAAACATGCC
CTGGCACAGG GCCTGAAAAT CTATCAAGAG CTAGAATCTC GCCTAAACTC TGACCCACAG
GCATTCCCCC TGCGCATCGG GTTCGGCTCA GGCCGAATGT CCATTCGACT GGCTCTGCTT
CTAGATGGCG AGGAGGGGCA AGAACCCAAA ACCCGCAAAA CCGCCGGGCA CTCTAACCCC
AAGGACGGCT TCCCCATGGG TTGGGCTATT GCCAGGCTCG AGCCTTACTG A
 
Protein sequence
MSFMEAYRLE LELLGPVHVG TGEAFPAYSY LVDEARKEVL ILDSGRLLEL LSEKQRDNYL 
QAVAQGPKQA QNTLRSLWGS GLLDLTPAVL RRVAASPAFI NTVKSATDAA GLEFRTLPRS
PLGAYLPGSS VKGALRTAWM FQRILKRGQD IGYHDRWTWG KKPPKDEWPL VQPPKSINTR
VAQEFEALVL GYATDRGPNL HRDPFRQVRV GDGEPCKNLL LNRIGVFHPE GKMDGTVLLA
ETFRSKTRLA ALVRLHTGLA RQTHNDTVSH AISAQALIKA CQEYYQEVAA REKEFAEKHA
LAQGLKIYQE LESRLNSDPQ AFPLRIGFGS GRMSIRLALL LDGEEGQEPK TRKTAGHSNP
KDGFPMGWAI ARLEPY