13 homologs were found in PanDaTox collection
for query gene Dole_0740 on replicon NC_009943
Organism: Desulfococcus oleovorans Hxd3



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009943  Dole_0740  CRISPR-associated RAMP Csm5 family protein  100 
 
 
391 aa  823    Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_1345  CRISPR-associated RAMP Csm5 family protein  54.1 
 
 
390 aa  439  9.999999999999999e-123  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_0703  CRISPR-associated RAMP protein, Csm5 family  28.18 
 
 
376 aa  66.2  0.0000000008  Meiothermus silvanus DSM 9946  Bacteria  normal  0.932167  hitchhiker  0.00582507 
 
 
-
 
NC_013946  Mrub_0219  Csm5 family CRISPR-associated RAMP protein  25 
 
 
376 aa  62.4  0.00000001  Meiothermus ruber DSM 1279  Bacteria  normal  0.684948  normal 
 
 
-
 
NC_012917  PC1_3260  hypothetical protein  20.48 
 
 
562 aa  55.8  0.000001  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_013502  Rmar_2822  CRISPR-associated RAMP protein, Csm5 family  24.26 
 
 
550 aa  49.7  0.00008  Rhodothermus marinus DSM 4252  Bacteria  normal  0.0845679  n/a   
 
 
-
 
NC_008532  STER_0977  hypothetical protein  25.3 
 
 
357 aa  47.4  0.0005  Streptococcus thermophilus LMD-9  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_1093  CRISPR-associated RAMP Csm5 family protein  23.12 
 
 
379 aa  46.2  0.001  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_2479  CRISPR-associated RAMP Csm5 family protein  24.35 
 
 
362 aa  45.4  0.001  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_1013  CRISPR-associated RAMP Csm5 family protein  23.12 
 
 
379 aa  46.2  0.001  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_010831  Cphamn1_1256  CRISPR-associated RAMP protein, Csm5 family  22.97 
 
 
380 aa  45.8  0.001  Chlorobium phaeobacteroides BS1  Bacteria  normal  hitchhiker  0.00374145 
 
 
-
 
NC_008346  Swol_1752  hypothetical protein  29.29 
 
 
380 aa  43.1  0.009  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_1633  CRISPR-associated RAMP protein, Csm5 family  25.54 
 
 
485 aa  43.1  0.009  Rhodothermus marinus DSM 4252  Bacteria  decreased coverage  0.0000163126  n/a   
 
 
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