| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_1392 |
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| Symbol | |
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| ID | 5451905 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | + |
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| Start bp | 1502404 |
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| End bp | 1503549 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 640875167 |
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| Product | CRISPR-associated RAMP Csm5 family protein |
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| Protein accession | YP_001410895 |
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| Protein GI | 154250070 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1332] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) |
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| TIGRFAM ID | [TIGR01899] CRISPR-associated RAMP protein, Csm5 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGGTTGA GAATTGAGCC AGTCTCTCCT GTATATATAG GCTCAGGTGA GAAAATAGGT
AAGTTTGAAA TGCTAATTCG TGGTGACAAA ACATACGTTT TAGATTTTGA CAAACTAATG
TCTAAGAACA ATTTTGTGGA ATATTTTGTT GCAAACATTG ATATAATCCT TGAACCGTCA
AAAAAAGACA TAGCCCTGGA AAAAATATTC AAAGCTCTAA AAATGAACGT CGAAGATTAT
ACAAAATTTG TCTTTCAAAC CATCATGGAT GAAGAGTCTG CCAAGACTTT ACAGATTAGT
AAATTCATAC ACTCAGCAAA CAGAAGATAC ATCCCCGGAA CATCGATTAA AGGTGCACTT
CGAACGATGT TAATCAAGGC TACGTCACTA AGAGAAAAAA TGACAAGAAA ATTTGGAGAT
AACAATTCGG TCAACGACAT CAGAAAAAAT GCAATCGAAT CTGAATTGGT AGGTTTTCCG
CAGCAGTCCA TATTTAAATT TCTAAGAGTT TCGGATAGTA CTTTCATCGA TAGCAGATAC
ATCAACGTGA AAAAGGTGGA GATAATTCAC CTTTCAAATG TAAGGGCTCA GATACCGCAG
TTTATCGAGG CATGGTTACC TGAAAACAAT ACAGACGGCC AGAGCAATTC TGTAGAGGTA
ACCGTCGAAT TTAAGAACGA CTTATACAGA TTAGCGTTGG AAAAAAGAAA TATTTCAAGA
ATATGTGCTA TTCCAGAGCT CGCCGCAATA CTTACGCAAA AGGACAAGTT TATTGCTGCA
ATGAAGAAGG CAAATAACGA AGTTATTCGG ATCGAGAAAG AAAAGATCAG TAAACTTAAA
GATTTTTCAG ATCAAAACAG GCAGCAGATA AAAAAAGTAC TCCAAACTTT CTATGATGAT
ATCGAAGCTC AGAATGAGCA ACTTCAAGAC TCATTCTTCC TCAGACTTGG TGGACATACT
GGATTTTATT CAAAGACAAT TTTCGAGAAA CCTCTTTCTG GAGAGCTGGT CAGATTCTTG
GGAAGATTTG GATACAGAAA TCTGAACATG AACGAATTTC CGATAACCAC AAAAATTGTC
TGGCTTTCGC CTTCTCCGAA CGAAGTGAAG CCACTTGGAT GGGTTAAAGT TACAGTCTTA
GATTAA
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| Protein sequence | MRLRIEPVSP VYIGSGEKIG KFEMLIRGDK TYVLDFDKLM SKNNFVEYFV ANIDIILEPS
KKDIALEKIF KALKMNVEDY TKFVFQTIMD EESAKTLQIS KFIHSANRRY IPGTSIKGAL
RTMLIKATSL REKMTRKFGD NNSVNDIRKN AIESELVGFP QQSIFKFLRV SDSTFIDSRY
INVKKVEIIH LSNVRAQIPQ FIEAWLPENN TDGQSNSVEV TVEFKNDLYR LALEKRNISR
ICAIPELAAI LTQKDKFIAA MKKANNEVIR IEKEKISKLK DFSDQNRQQI KKVLQTFYDD
IEAQNEQLQD SFFLRLGGHT GFYSKTIFEK PLSGELVRFL GRFGYRNLNM NEFPITTKIV
WLSPSPNEVK PLGWVKVTVL D
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