Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_1633 |
Symbol | |
ID | 8568285 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | - |
Start bp | 1893345 |
End bp | 1894802 |
Gene Length | 1458 bp |
Protein Length | 485 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | CRISPR-associated RAMP protein, Csm5 family |
Protein accession | YP_003290907 |
Protein GI | 268317188 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000163126 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGCTA TGCCGCATAC AGTTCGTCGG ATTGCAGAGC GGGTGCAGGC TGTCCTGGAA GTACTTACGC CCGTCCATAT AGGCTGTGGG ATCAGGTGGC AGAAGAATCT CGACTTTGTT GTAGACAAAG AGACGTATGT AATTCCCGAG CATGTCCTGA TGACCTATCT GCAGGAGCAT CCTGAGTCGC TGGCGGACTT TGAGGATGAA CAGAGGCGTG CGGAATTGCT GTGGGAGACT GAGGGAGGAA TTGAGTATGA ACTACCCTGT CGCAGCAGGG AAATTCTAGT TTTTATGCGG AATGGCAATG GGCAACCCTA TGTGCCGGGA TCGTCGCTCA AGGGGGCACT GCGCACGGTG ATTTTTCGAC ATTTCTGGGA ACAATTAGAC CAGGGTCGTA AGCAGCGGTT GCTGGCGAAA ACTGGCGAAA AAAGGGAGTC GGCAGCGCAA CCGCTGGTTC GTGAAGTGCT GGGCCGTGAC CCCAATCATG ACCTGTTGCG TGTGCTGGCC GTGTTCGACA CGCCTGTGCA TCAGGAAGAT CTTGACCTGT ACCGGTTGTT CATTCTAAAC CTGACCGATC CGAAAGGCAG ACGCTACGGA TGGCGTAATG TACCACGAAA GCGCTCCTTT AGTGATATCC GTGACGCTAC TCCAATTTAC GCCGAGATGC TCAGGCCTGG TACGCAGGGT GTTTTGTCGT TGCGGCTGGA TCGTTTCCTT CTGGATGATG AACGGGCCGA GCGGGAATTA CATTTTAGCG ATAAGTTAAG CCTGGAGCAG TTAGCACGCT GGGCAAATCG CCATGCTCGG CACCTGCTGA AACGCGAACA GGCCTTTCTG GAACAATGTG GCAATGGGAG ACTGCAGCGA TTGCTCGACA GTATTGACAG TTTGGTGCAG TTGATTCCGG CCGAAGATAC GCCGGAAGAG GGCAAACGCT TTCTGCTACG TCTGGGATGG AGTAGCGGAT GGCGATCAAT GACAGGCGAT TATCTTGAAG AGGAAAACCT GAATGAGATT CGAAAAAAAT ATGGTCTGAA TTACGACAGA AATAAAAATC AACTCAGATT CCCTGTTTTC CCAAAAACGC GAAAGATTGT CTTTGATGGA GAGGAGCCAT CCTGGTTGGC CGGCTGGGTT CAGATCAGGT TGGATGCTGA CATTCAGCAA GCGAAAAAGT CAGCGTCCGA AGTGGATACA GAGGCGAGGT CTTCGCGTCC ACAAATGGAA ATCACTACTT CAGGAGATGT CCCTCAGGAT TATGAGACCG GCGTAGTACA CAATCTGAAA CTCAGCAAAG GATACGGCAC GATTTTATCA GACAAGGGCG GTGAACCAAT TCGGTTTGAT TTTGCAACCG CAGATATGAC CGGCCTGGAG AAAGGCGCTC GGGTACGCTT TCGTCTGGTA AAGGAAGAAA ATCAATACCG CGCTGTTGAT GTCAAAAAGG TGAATTGA
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Protein sequence | MEAMPHTVRR IAERVQAVLE VLTPVHIGCG IRWQKNLDFV VDKETYVIPE HVLMTYLQEH PESLADFEDE QRRAELLWET EGGIEYELPC RSREILVFMR NGNGQPYVPG SSLKGALRTV IFRHFWEQLD QGRKQRLLAK TGEKRESAAQ PLVREVLGRD PNHDLLRVLA VFDTPVHQED LDLYRLFILN LTDPKGRRYG WRNVPRKRSF SDIRDATPIY AEMLRPGTQG VLSLRLDRFL LDDERAEREL HFSDKLSLEQ LARWANRHAR HLLKREQAFL EQCGNGRLQR LLDSIDSLVQ LIPAEDTPEE GKRFLLRLGW SSGWRSMTGD YLEEENLNEI RKKYGLNYDR NKNQLRFPVF PKTRKIVFDG EEPSWLAGWV QIRLDADIQQ AKKSASEVDT EARSSRPQME ITTSGDVPQD YETGVVHNLK LSKGYGTILS DKGGEPIRFD FATADMTGLE KGARVRFRLV KEENQYRAVD VKKVN
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