Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_2822 |
Symbol | |
ID | 8569493 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013502 |
Strand | - |
Start bp | 24946 |
End bp | 26598 |
Gene Length | 1653 bp |
Protein Length | 550 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | |
Product | CRISPR-associated RAMP protein, Csm5 family |
Protein accession | YP_003292077 |
Protein GI | 268318359 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0845679 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGGTTA CGCTGAAGCT CATAACGCGA TCACCGCTGC ATATCGGCTC GGGTCATGAG CTGGAATCCT TCGAGTACAT CATCCATGAC GGGTTTTTCT GGCGATTGGA CATTAATCGG GTAATGGCTT TTCTGCTGGA TGAGATTGGC GAGGAGGCCC TTGAACGATT CTCGTCATGG ATTGAGCGGG AGACCGAGCG TCTTGCCGAC GCTCGTAACA ACAGGGAACA GGCTGAAATT CGCCGCAGCC TCACGTTGCG AACCTTTGTG CGCGGCGAGC TGGGGCGACC GGATCTGGAC GCTCGCCTGC TTCAGCAGCT TCAGAGCCTT TCGCGCTATG CAATGCGCAC GTCTTTTTCT GAGTTCAGAC AGCTCGTGCG CGAGCAGCTC AAAGATCCAG ATGGACGCCT TTACATTCCG GGGTCCTCGT TGAAGGGTGC ATTGCGCACC TGCCTGCTCT ACCAGGTTCT GGTGGAGGCC GATGAGAAGA CGCACCGGCG CTGGCTTGCC GAGTTGAGGG ATTCGCTGGA AAGGGCCGGC AGAAGCCTGA ATCGCAGAGA GCGCGTGTTT TTTTCCCGGT GGCTTGAGGA GGACGTCTTC TACTGTGGCG TACGAAAAAA AGGAAAGGTG AGCTGGCGAG ATGCGCAATT TGATCTGCTG AAATTTCTGA GGATCAGCGA TTCAAACAGC GTGGCAGCCG ACGAGATTGG TGTCGTGACT GATGTTGAGA TATTCCTGCC CGGCGCTGAA CCGCAACCAC AGGCGCCACC GGTGGAAGCG CTGGAGGCCG GGGCTGAGCT TCAGGCACAG GTGGGTTTTG ATGTATCTTT TTTCCGGGAA GCTCACCGGC TACTTGCGCG TGGGGAGCAG GGCATGGGGA CCGATATATG GATTGGCCTA CCGGAGAAAT TCCAGCGGCT TTACGGATTG ACGCTGGAGG AGGCCGCCGC TATGGAAGCG GAGGAGCTGG AACGGCGTCT GTTGGAGCGT GTGCGTAAGG CCGCACGCAA TTTTGGCCGT GCGCTGAAGG CATTTGAGAA GGAGTGGTGC CGTCGAGCAG AACGCGGAAG CACGCTGCAG CAGGCCCGAC GCCTGCAGCG ATTTTATGAT GAGCTTCCGG ATGATTGTCT GCGTTTAGGG TGGGGAAGTG GCTTTGCTGC CGTTACGGTC TATCTGGCCT TGCGCGAAAA GCCGGCCTGG AAAGAACCGC TGCAGAATCT GCTGCATCGT CTCTTTTCGC TCAAAGAGCG GGAAGATCTG CTGCAGACCT TTCCGACGTC ACGGCGCATG GCTATTGATG GCGAAGGAAC AATGGTGGAA GAGCCGATGG GATGGGTAGA GTTGGAGTGG CCCTGGTCGG CAACCGAAGC GGCGGCTACT ACCGAAGAGG AGACCGCCGA GGATGAATCG GACCTGTGGG TGGATCAGAT CGGACCCAAT AGTCAGGATA TTATCGCCGA GGTGGTGGAT AACAGTCGTG CACCGTTTAC GATTCGCATT TTTGTGCGCG GACTTGAAAA TGAAAGATTC CCCTGTGGAG GGGCCAGCCA TAGAGCGATC GAGGTGGGGC AGCGTATTCG GGTCAAGGTG TCTCAGTGGA ACAAAAAAGC CGGACGTCCC ACCATGTTTT CCGTACAGAG CATCCGGGTT TAG
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Protein sequence | MPVTLKLITR SPLHIGSGHE LESFEYIIHD GFFWRLDINR VMAFLLDEIG EEALERFSSW IERETERLAD ARNNREQAEI RRSLTLRTFV RGELGRPDLD ARLLQQLQSL SRYAMRTSFS EFRQLVREQL KDPDGRLYIP GSSLKGALRT CLLYQVLVEA DEKTHRRWLA ELRDSLERAG RSLNRRERVF FSRWLEEDVF YCGVRKKGKV SWRDAQFDLL KFLRISDSNS VAADEIGVVT DVEIFLPGAE PQPQAPPVEA LEAGAELQAQ VGFDVSFFRE AHRLLARGEQ GMGTDIWIGL PEKFQRLYGL TLEEAAAMEA EELERRLLER VRKAARNFGR ALKAFEKEWC RRAERGSTLQ QARRLQRFYD ELPDDCLRLG WGSGFAAVTV YLALREKPAW KEPLQNLLHR LFSLKEREDL LQTFPTSRRM AIDGEGTMVE EPMGWVELEW PWSATEAAAT TEEETAEDES DLWVDQIGPN SQDIIAEVVD NSRAPFTIRI FVRGLENERF PCGGASHRAI EVGQRIRVKV SQWNKKAGRP TMFSVQSIRV
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