Gene Maeo_1079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMaeo_1079 
Symbol 
ID5326386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus aeolicus Nankai-3 
KingdomArchaea 
Replicon accessionNC_009635 
Strand- 
Start bp1126329 
End bp1127486 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content26% 
IMG OID640788475 
ProductCRISPR-associated RAMP Csm5 family protein 
Protein accessionYP_001325268 
Protein GI150401502 
COG category[L] Replication, recombination and repair 
COG ID[COG1332] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) 
TIGRFAM ID[TIGR01899] CRISPR-associated RAMP protein, Csm5 family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.485474 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATAT TTAGACCAAA TGAATCAAAA ACTAAACCAA ATAATGGAAT AAATCCCACT 
AAAAAAATTC TAAAAATAAC CACGATATCT CCTTTAAATA TAGGAAATGG AGATGTTTAT 
GCCAACATGG ACTATTATAT TGAAAATAAT AAAGCAAAAG CAAAAATAAT CAACATAGAA 
GAATTATTTG AAAGTATAGA TGATATAAAT AAAATAAACA AATTGGTAAA TTTAATAAAA 
CACAATATGG ATAATAATAG AATGAAAGGG GGCGTAAAAG AAACTTATGA GAGCATAGGT 
CTTTATCCTG ATGAACATAT TTTAAAAGAA GTCGATTGTA AAATCAACAA GGATGCAAGA 
GTGCAGGTTA GAAAATTTAT AAATCAAAAT GGAAAATACT ATGTTCCAGG GAGCTCCTTA 
AAAGGTGCTA TAAGGACGGC GTATATTTTT GATTATTATG ATAAAAATAT TGGCAAATTA 
GTTAATATTT TAGAAAATAA AAAAATATAC GACAATAAAA AAGGAAATGA GGTTGTAAAT 
ACTGCCATTG GGAGGAATAT TAAAGATGAT TTCTTTAAAT ATTTGTTAAT TACAGATAGC 
AATATTATAC CACAGGAAAA TTTCGAATTT ATCAACACCA TAAGATACAA TACAATGGAT 
GTAAGAAAAG ATAAAAAATC CAGTAATAAC ATTCCAGAAC CAAAAGAAGT CCTTAAAAAA 
AATTCAGAGC TCAGTGTAGA GCTCACCATA AAAGATGGTT TTCCAAAAAA TTTTGAAGAT 
ATAAAAAACA TGTGCAACAA GTTTTCAAAA ACAATAATAG AGTTTGAATT AAATAACAAA 
TATTTACCGG ATGAAACAAT AAAATTTTAC AATAATTTGC TTAACAACAT AAAAAATAAT 
GATAATTCAT TTTATTTAAC AATAGGTTCT GGGAGCTCCT ATCTATCTAA AACTATATAT 
CTATTATTGT GGAAACACGA CAAAGGTAAT ACAAAAGGAT ACTTAAATAT TATGAAAAAC 
ATATTTGAAA AGGAGAAAAA TAGAAAATTA AAGGCTTCCT TAAAAGGTGC AAGACATTAT 
ATTGAATTTC CAAGAACAAG GGTATTAGAT AGTAATAAAA ACATTCCAAT GGGATGGGTA 
AAAATAACGG AGGAATAA
 
Protein sequence
MNIFRPNESK TKPNNGINPT KKILKITTIS PLNIGNGDVY ANMDYYIENN KAKAKIINIE 
ELFESIDDIN KINKLVNLIK HNMDNNRMKG GVKETYESIG LYPDEHILKE VDCKINKDAR 
VQVRKFINQN GKYYVPGSSL KGAIRTAYIF DYYDKNIGKL VNILENKKIY DNKKGNEVVN 
TAIGRNIKDD FFKYLLITDS NIIPQENFEF INTIRYNTMD VRKDKKSSNN IPEPKEVLKK 
NSELSVELTI KDGFPKNFED IKNMCNKFSK TIIEFELNNK YLPDETIKFY NNLLNNIKNN 
DNSFYLTIGS GSSYLSKTIY LLLWKHDKGN TKGYLNIMKN IFEKEKNRKL KASLKGARHY 
IEFPRTRVLD SNKNIPMGWV KITEE