11 homologs were found in PanDaTox collection
for query gene Rcas_1981 on replicon NC_009767
Organism: Roseiflexus castenholzii DSM 13941



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009767  Rcas_1981  CRISPR-associated RAMP Csm5 family protein  100 
 
 		 476 aa  950    Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  0.244308 
 
 
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NC_011831  Cagg_3447  CRISPR-associated RAMP protein, Csm5 family  42.83 
 
 		 471 aa  332  1e-89  Chloroflexus aggregans DSM 9485  Bacteria  normal  1  normal  0.186008 
 
 
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NC_009972  Haur_2479  CRISPR-associated RAMP Csm5 family protein  28 
 
 		 362 aa  91.7  2e-17  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_009616  Tmel_1674  CRISPR-associated RAMP Csm5 family protein  25.45 
 
 		 353 aa  73.9  0.000000000006  Thermosipho melanesiensis BI429  Bacteria  normal  0.901558  n/a   
 
 
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NC_012034  Athe_2700  CRISPR-associated RAMP protein, Csm5 family  21.07 
 
 		 390 aa  53.9  0.000007  Anaerocellum thermophilum DSM 6725  Bacteria  normal  1  n/a   
 
 
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NC_013501  Rmar_1633  CRISPR-associated RAMP protein, Csm5 family  24 
 
 		 485 aa  52.8  0.00002  Rhodothermus marinus DSM 4252  Bacteria  decreased coverage  0.0000163126  n/a   
 
 
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NC_013502  Rmar_2822  CRISPR-associated RAMP protein, Csm5 family  31.47 
 
 		 550 aa  50.1  0.0001  Rhodothermus marinus DSM 4252  Bacteria  normal  0.0845679  n/a   
 
 
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NC_009486  Tpet_1093  CRISPR-associated RAMP Csm5 family protein  27.95 
 
 		 379 aa  48.5  0.0002  Thermotoga petrophila RKU-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010831  Cphamn1_1256  CRISPR-associated RAMP protein, Csm5 family  24.3 
 
 		 380 aa  49.3  0.0002  Chlorobium phaeobacteroides BS1  Bacteria  normal  1  hitchhiker  0.00374145 
 
 
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NC_010483  TRQ2_1013  CRISPR-associated RAMP Csm5 family protein  27.33 
 
 		 379 aa  47  0.0008  Thermotoga sp. RQ2  Bacteria  normal  1  n/a   
 
 
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NC_008701  Pisl_1542  CRISPR-associated RAMP Csm5 family protein  23.05 
 
 		 342 aa  45.8  0.002  Pyrobaculum islandicum DSM 4184  Archaea  normal  0.749517  normal  0.215937 
 
 
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