11 homologs were found in PanDaTox collection
for query gene Vapar_2996 on replicon NC_012791
Organism: Variovorax paradoxus S110



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_012791  Vapar_2996  N-acetylmuramoyl-L-alanine amidase  100 
 
 		 223 aa  462  1e-129  Variovorax paradoxus S110  Bacteria  normal  0.815904  n/a   
 
 
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NC_008752  Aave_4248  N-acetylmuramoyl-L-alanine amidase  42.33 
 
 		 192 aa  157  1e-37  Acidovorax citrulli AAC00-1  Bacteria  normal  0.580709  normal  0.839189 
 
 
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NC_008752  Aave_3098  N-acetylmuramoyl-L-alanine amidase  38.25 
 
 		 216 aa  151  1e-35  Acidovorax citrulli AAC00-1  Bacteria  normal  0.306207  normal  0.228465 
 
 
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NC_007510  Bcep18194_A3957  N-acetylmuramoyl-L-alanine amidase  40.91 
 
 		 204 aa  146  3e-34  Burkholderia sp. 383  Bacteria  normal  0.0959581  normal  0.0994199 
 
 
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NC_012791  Vapar_2150  N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD  42.01 
 
 		 200 aa  135  3.0000000000000003e-31  Variovorax paradoxus S110  Bacteria  normal  0.375591  n/a   
 
 
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NC_010002  Daci_2421  hypothetical protein  77.27 
 
 		 98 aa  110  2.0000000000000002e-23  Delftia acidovorans SPH-1  Bacteria  normal  0.960852  normal  1 
 
 
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NC_010002  Daci_3333  N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD  33.02 
 
 		 210 aa  105  4e-22  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  0.277634 
 
 
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NC_010002  Daci_1857  N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD  31.22 
 
 		 210 aa  95.9  4e-19  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  1 
 
 
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NC_010002  Daci_0898  hypothetical protein  56.16 
 
 		 98 aa  80.9  0.00000000000001  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  0.572829 
 
 
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NC_012791  Vapar_0546  hypothetical protein  38.46 
 
 		 179 aa  42.4  0.006  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
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NC_013440  Hoch_3381  N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD  28.41 
 
 		 655 aa  41.6  0.01  Haliangium ochraceum DSM 14365  Bacteria  normal  0.26749  normal  0.167867 
 
 
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