Gene Aave_4248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_4248 
Symbol 
ID4669912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp4706578 
End bp4707156 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content64% 
IMG OID639825434 
ProductN-acetylmuramoyl-L-alanine amidase 
Protein accessionYP_972562 
Protein GI120612884 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.580709 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.839189 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACATCG ACAAAACCGG AAAAGTGCAG CATCCGCGTG TGCGGCTGGC GATCCACGGG 
GCCATCCAGC GCGGCGAGAT GAAGGTGATC AACGGCATCA TCGTCCACCA GACGGGGGCC
TACACGGCGC AGTCTTCATT CAACAGCTAC AAGACGGCCA ACCCCAACGG CGCGCACTTC
CTCATCGACA AGGACGGCAC GATCTACCAG ACGGCCTCCA TCTACCAGAA GACCCACCAC
GTGGGTTTCA TCAAGTCGCG CTGCATGGAG GAGCACAAGT GCACGCCGGC CGAGGTCGCC
GCGCTCAAGG GCAAGACCGT GGGCCGCCAG ATCGGCACGG TGGAAAAGCA CAAGCCCTTC
CCCAGGCGCT ACCCGGACAA CAGCGACTCC ATCGGCATCG AGATCGTCTC GGGGGTGCAG
GGCCAGGCCT TCGAAGCCGT GACGGGCGCG CAGCAGGTCT CGCTGACGTG GCTGGCCGCG
CAGCTCACGT CCACGCTGGG CATCTCCACG CGCGAGATCT ACCGGCATCC CCAGGTTTCC
TGGAAGAACG CAACCGAAGC GAGTACGGCG CAATGGTGA
 
Protein sequence
MDIDKTGKVQ HPRVRLAIHG AIQRGEMKVI NGIIVHQTGA YTAQSSFNSY KTANPNGAHF 
LIDKDGTIYQ TASIYQKTHH VGFIKSRCME EHKCTPAEVA ALKGKTVGRQ IGTVEKHKPF
PRRYPDNSDS IGIEIVSGVQ GQAFEAVTGA QQVSLTWLAA QLTSTLGIST REIYRHPQVS
WKNATEASTA QW