14 homologs were found in PanDaTox collection
for query gene Daci_1857 on replicon NC_010002
Organism: Delftia acidovorans SPH-1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010002  Daci_1857  N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD  100 
 
 		 210 aa  437  9.999999999999999e-123  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  1 
 
 
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NC_010002  Daci_3333  N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD  66.19 
 
 		 210 aa  310  6.999999999999999e-84  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  0.277634 
 
 
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NC_012791  Vapar_2150  N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD  40.98 
 
 		 200 aa  147  1.0000000000000001e-34  Variovorax paradoxus S110  Bacteria  normal  0.375591  n/a   
 
 
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NC_008752  Aave_4248  N-acetylmuramoyl-L-alanine amidase  36 
 
 		 192 aa  124  7e-28  Acidovorax citrulli AAC00-1  Bacteria  normal  0.580709  normal  0.839189 
 
 
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NC_007510  Bcep18194_A3957  N-acetylmuramoyl-L-alanine amidase  38.22 
 
 		 204 aa  124  2e-27  Burkholderia sp. 383  Bacteria  normal  0.0959581  normal  0.0994199 
 
 
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NC_012791  Vapar_2996  N-acetylmuramoyl-L-alanine amidase  31.22 
 
 		 223 aa  95.9  4e-19  Variovorax paradoxus S110  Bacteria  normal  0.815904  n/a   
 
 
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NC_008752  Aave_3098  N-acetylmuramoyl-L-alanine amidase  30.8 
 
 		 216 aa  92.8  3e-18  Acidovorax citrulli AAC00-1  Bacteria  normal  0.306207  normal  0.228465 
 
 
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NC_010002  Daci_0898  hypothetical protein  38.03 
 
 		 98 aa  57.8  0.0000001  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  0.572829 
 
 
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NC_007958  RPD_3403  N-acetylmuramoyl-L-alanine amidase  30 
 
 		 288 aa  46.6  0.0003  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.0566227  normal  1 
 
 
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NC_007778  RPB_1985  negative regulator of AmpC, AmpD  30.93 
 
 		 288 aa  45.1  0.0009  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.116261  normal  1 
 
 
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NC_007925  RPC_2185  negative regulator of AmpC, AmpD  29.9 
 
 		 289 aa  44.7  0.001  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.415587  normal  1 
 
 
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NC_011004  Rpal_4057  N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD  29.9 
 
 		 288 aa  44.7  0.001  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.100978  n/a   
 
 
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NC_007794  Saro_3051  negative regulator of AmpC, AmpD  27.78 
 
 		 234 aa  42.4  0.004  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.8874  n/a   
 
 
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NC_009511  Swit_0070  N-acetylmuramoyl-L-alanine amidase  28.57 
 
 		 241 aa  42  0.006  Sphingomonas wittichii RW1  Bacteria  normal  1  normal  1 
 
 
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