15 homologs were found in PanDaTox collection
for query gene Daci_3333 on replicon NC_010002
Organism: Delftia acidovorans SPH-1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010002  Daci_3333  N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD  100 
 
 		 210 aa  437  9.999999999999999e-123  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  0.277634 
 
 
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NC_010002  Daci_1857  N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD  66.19 
 
 		 210 aa  310  6.999999999999999e-84  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012791  Vapar_2150  N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD  41.55 
 
 		 200 aa  150  2e-35  Variovorax paradoxus S110  Bacteria  normal  0.375591  n/a   
 
 
-
 
NC_007510  Bcep18194_A3957  N-acetylmuramoyl-L-alanine amidase  41.06 
 
 		 204 aa  142  3e-33  Burkholderia sp. 383  Bacteria  normal  0.0959581  normal  0.0994199 
 
 
-
 
NC_008752  Aave_4248  N-acetylmuramoyl-L-alanine amidase  35.83 
 
 		 192 aa  121  6e-27  Acidovorax citrulli AAC00-1  Bacteria  normal  0.580709  normal  0.839189 
 
 
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NC_008752  Aave_3098  N-acetylmuramoyl-L-alanine amidase  32.72 
 
 		 216 aa  109  3e-23  Acidovorax citrulli AAC00-1  Bacteria  normal  0.306207  normal  0.228465 
 
 
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NC_012791  Vapar_2996  N-acetylmuramoyl-L-alanine amidase  33.02 
 
 		 223 aa  105  4e-22  Variovorax paradoxus S110  Bacteria  normal  0.815904  n/a   
 
 
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NC_010002  Daci_0898  hypothetical protein  40.91 
 
 		 98 aa  60.5  0.00000002  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  0.572829 
 
 
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NC_010002  Daci_2421  hypothetical protein  39.34 
 
 		 98 aa  50.4  0.00002  Delftia acidovorans SPH-1  Bacteria  normal  0.960852  normal  1 
 
 
-
 
NC_013165  Shel_22540  negative regulator of beta-lactamase expression  45.28 
 
 		 296 aa  45.1  0.0007  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.517371  normal  0.554109 
 
 
-
 
NC_008390  Bamb_0496  N-acetyl-anhydromuranmyl-L-alanine amidase  33.82 
 
 		 196 aa  43.5  0.002  Burkholderia ambifaria AMMD  Bacteria  normal  1  n/a   
 
 
-
 
NC_010551  BamMC406_0521  N-acetyl-anhydromuranmyl-L-alanine amidase  33.82 
 
 		 196 aa  43.5  0.002  Burkholderia ambifaria MC40-6  Bacteria  normal  0.5108  normal  0.316585 
 
 
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NC_011901  Tgr7_1955  N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD  31.67 
 
 		 275 aa  42.4  0.005  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  1  n/a   
 
 
-
 
NC_002978  WD1073  N-acetylmuramoyl-L-alanine amidase  32.47 
 
 		 497 aa  41.6  0.008  Wolbachia endosymbiont of Drosophila melanogaster  Bacteria  unclonable  0.00874601  n/a   
 
 
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NC_009767  Rcas_0212  N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD  31.17 
 
 		 418 aa  41.6  0.01  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  0.521983 
 
 
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