42 homologs were found in PanDaTox collection
for query gene Shel_22540 on replicon NC_013165
Organism: Slackia heliotrinireducens DSM 20476



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013165  Shel_22540  negative regulator of beta-lactamase expression  100 
 
 		 296 aa  608  1e-173  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.517371  normal  0.554109 
 
 
-
 
NC_011004  Rpal_4057  N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD  26.77 
 
 		 288 aa  59.7  0.00000006  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.100978  n/a   
 
 
-
 
NC_007925  RPC_2185  negative regulator of AmpC, AmpD  28.39 
 
 		 289 aa  58.9  0.00000009  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.415587  normal  1 
 
 
-
 
NC_007964  Nham_1270  negative regulator of AmpC, AmpD  28.02 
 
 		 289 aa  57.4  0.0000003  Nitrobacter hamburgensis X14  Bacteria  normal  1  n/a   
 
 
-
 
NC_002978  WD1073  N-acetylmuramoyl-L-alanine amidase  24.85 
 
 		 497 aa  57  0.0000004  Wolbachia endosymbiont of Drosophila melanogaster  Bacteria  unclonable  0.00874601  n/a   
 
 
-
 
NC_010505  Mrad2831_2007  N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD  30 
 
 		 251 aa  55.5  0.000001  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.0212673 
 
 
-
 
NC_007778  RPB_1985  negative regulator of AmpC, AmpD  26.37 
 
 		 288 aa  55.5  0.000001  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.116261  normal  1 
 
 
-
 
NC_009511  Swit_0070  N-acetylmuramoyl-L-alanine amidase  30.2 
 
 		 241 aa  55.1  0.000001  Sphingomonas wittichii RW1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007958  RPD_3403  N-acetylmuramoyl-L-alanine amidase  27.54 
 
 		 288 aa  54.7  0.000002  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.0566227  normal  1 
 
 
-
 
NC_009485  BBta_6183  1 N-acetylmuramoyl-L-alanine amidase  31.03 
 
 		 283 aa  54.3  0.000002  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.301475  normal  0.754247 
 
 
-
 
NC_007406  Nwi_1042  N-acetylmuramoyl-L-alanine amidase  27.47 
 
 		 283 aa  53.9  0.000003  Nitrobacter winogradskyi Nb-255  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007794  Saro_3051  negative regulator of AmpC, AmpD  31.76 
 
 		 234 aa  52.4  0.000009  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.8874  n/a   
 
 
-
 
NC_008347  Mmar10_2088  N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD  29.05 
 
 		 224 aa  51.6  0.00001  Maricaulis maris MCS10  Bacteria  normal  0.841917  normal  0.680564 
 
 
-
 
NC_010581  Bind_2350  N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD  28.82 
 
 		 304 aa  51.2  0.00002  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  1  normal  0.568206 
 
 
-
 
NC_009719  Plav_2410  N-acetylmuramoyl-L-alanine amidase  30.25 
 
 		 247 aa  50.1  0.00004  Parvibaculum lavamentivorans DS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009428  Rsph17025_1291  N-acetylmuramoyl-L-alanine amidase  30.63 
 
 		 290 aa  50.1  0.00005  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009428  Rsph17025_2109  N-acetylmuramoyl-L-alanine amidase  30.63 
 
 		 290 aa  50.1  0.00005  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.395823  normal  1 
 
 
-
 
NC_009767  Rcas_0212  N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD  29.69 
 
 		 418 aa  49.7  0.00005  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  0.521983 
 
 
-
 
NC_008686  Pden_0578  N-acetylmuramoyl-L-alanine amidase  26.88 
 
 		 208 aa  49.7  0.00006  Paracoccus denitrificans PD1222  Bacteria  normal  0.508495  normal  0.467218 
 
 
-
 
NC_009049  Rsph17029_0947  N-acetylmuramoyl-L-alanine amidase  30.14 
 
 		 223 aa  49.3  0.00007  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.177704  normal  0.768005 
 
 
-
 
NC_011666  Msil_3546  N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD  30.28 
 
 		 255 aa  49.3  0.00007  Methylocella silvestris BL2  Bacteria  n/a    normal  0.457198 
 
 
-
 
NC_009636  Smed_2104  N-acetylmuramoyl-L-alanine amidase  28.91 
 
 		 254 aa  48.1  0.0002  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  0.312946 
 
 
-
 
NC_011901  Tgr7_1955  N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD  28.09 
 
 		 275 aa  47.4  0.0003  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  1  n/a   
 
 
-
 
NC_008048  Sala_1735  N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD  27.65 
 
 		 229 aa  47  0.0004  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.727181  normal  0.0896689 
 
 
-
 
NC_012850  Rleg_2867  N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD  25.98 
 
 		 253 aa  46.2  0.0006  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  0.973804 
 
 
-
 
NC_009428  Rsph17025_2224  N-acetylmuramoyl-L-alanine amidase  27.88 
 
 		 219 aa  45.8  0.0009  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.719824  normal  1 
 
 
-
 
NC_011004  Rpal_0662  N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD  27.68 
 
 		 464 aa  45.4  0.001  Rhodopseudomonas palustris TIE-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007493  RSP_2272  N-acetylmuramoyl-L-alanine amidase  30.41 
 
 		 223 aa  45.8  0.001  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.421086  n/a   
 
 
-
 
NC_010002  Daci_3333  N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD  45.28 
 
 		 210 aa  45.1  0.001  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  0.277634 
 
 
-
 
NC_010830  Aasi_0795  hypothetical protein  23.56 
 
 		 322 aa  45.1  0.002  Candidatus Amoebophilus asiaticus 5a2  Bacteria  n/a    normal  0.0964988 
 
 
-
 
NC_007510  Bcep18194_A3957  N-acetylmuramoyl-L-alanine amidase  38.71 
 
 		 204 aa  44.3  0.002  Burkholderia sp. 383  Bacteria  normal  0.0959581  normal  0.0994199 
 
 
-
 
NC_008752  Aave_4248  N-acetylmuramoyl-L-alanine amidase  33.02 
 
 		 192 aa  44.3  0.002  Acidovorax citrulli AAC00-1  Bacteria  normal  0.580709  normal  0.839189 
 
 
-
 
NC_008254  Meso_2018  N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD  28.67 
 
 		 251 aa  44.3  0.002  Chelativorans sp. BNC1  Bacteria  normal  0.169128  n/a   
 
 
-
 
NC_007643  Rru_A0960  AmpD (negative regulator of AmpC)  27.95 
 
 		 241 aa  43.9  0.003  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.0865958  n/a   
 
 
-
 
NC_010338  Caul_3680  N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD  28.38 
 
 		 243 aa  43.9  0.003  Caulobacter sp. K31  Bacteria  normal  0.86041  normal  0.729669 
 
 
-
 
NC_010511  M446_4374  N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD  27.64 
 
 		 249 aa  43.5  0.004  Methylobacterium sp. 4-46  Bacteria  normal  0.0600815  normal  1 
 
 
-
 
NC_011894  Mnod_4910  N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD  30.56 
 
 		 249 aa  43.5  0.004  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.456045  n/a   
 
 
-
 
NC_011989  Avi_2906  N-acetylmuramoyl-L-alanine amidase  28.17 
 
 		 252 aa  43.5  0.004  Agrobacterium vitis S4  Bacteria  normal  0.923766  n/a   
 
 
-
 
NC_011312  VSAL_I0777  N-acetylmuramoyl-L-alanine amidase  28.8 
 
 		 251 aa  43.5  0.005  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.458276  n/a   
 
 
-
 
NC_011369  Rleg2_2607  N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD  25.2 
 
 		 253 aa  43.1  0.005  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.559154  normal  1 
 
 
-
 
NC_009667  Oant_1732  N-acetylmuramoyl-L-alanine amidase  27.97 
 
 		 268 aa  42.7  0.007  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  1  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1416  N-acetylmuramoyl-L-alanine amidase  27.86 
 
 		 176 aa  42.4  0.009  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.0000125209  n/a   
 
 
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